Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.74□□□□□ -1.97
CLPTM1O96005 uc_338.11-201ENST00000619132 160 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 AC006504.8-201ENST00000621046 635 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.74□□□□□ -1.97
CLPTM1O96005 AC090617.10-201ENST00000624308 134 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.74□□□□□ -1.97
CLPTM1O96005 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.74□□□□□ -1.97
CLPTM1O96005 MTND4P14-201ENST00000435799 1354 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLPTM1O96005 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CLPTM1O96005 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CLPTM1O96005 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLPTM1O96005 SNORA72.1-201ENST00000363485 129 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 Y_RNA.245-201ENST00000364493 95 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 RNU6-867P-201ENST00000364956 107 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLPTM1O96005 RNU6-1127P-201ENST00000384580 107 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 MIR627-201ENST00000384979 97 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLPTM1O96005 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 RNU4-47P-201ENST00000410876 114 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 AC022028.1-201ENST00000412054 408 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.73□□□□□ -1.97
CLPTM1O96005 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.73□□□□□ -1.97
CLPTM1O96005 RPS15AP27-201ENST00000449183 343 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.73□□□□□ -1.97
CLPTM1O96005 HMGN2P26-201ENST00000463169 339 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 AC109925.1-201ENST00000478069 331 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 RPS29P2-201ENST00000479278 136 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 AL135752.1-201ENST00000479477 471 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 MTCO2P30-201ENST00000503662 364 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 SCARNA13-201ENST00000516672 275 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 SNORA20.3-201ENST00000516880 132 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 CENPUP1-201ENST00000526649 1202 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 AL137161.1-201ENST00000532231 390 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 TRAV28-201ENST00000557548 323 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.73□□□□□ -1.97
CLPTM1O96005 AC005730.3-201ENST00000583067 366 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 AC008739.2-201ENST00000597006 317 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 BNIP3P9-201ENST00000603714 553 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 BNIP3P10-201ENST00000605360 577 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLPTM1O96005 AC018692.3-201ENST00000623929 123 ntBASIC2.73□□□□□ -1.97
CLPTM1O96005 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLPTM1O96005 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.73□□□□□ -1.97
CLPTM1O96005 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.72□□□□□ -1.97
CLPTM1O96005 RNA5SP374-201ENST00000362939 125 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 RNU6-715P-201ENST00000365204 103 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 SNORA4.3-201ENST00000365564 137 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 Y_RNA.378-201ENST00000365652 113 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLPTM1O96005 MIR491-201ENST00000384877 84 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 RNA5SP118-201ENST00000410385 109 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 ERLEC1P1-201ENST00000433806 578 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 AL512844.2-201ENST00000433990 593 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 Z82210.1-201ENST00000440037 231 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 SCARNA18-201ENST00000459004 134 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 AL160314.1-201ENST00000490836 438 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.72□□□□□ -1.97
CLPTM1O96005 Y_RNA.665-201ENST00000516177 98 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.72□□□□□ -1.97
CLPTM1O96005 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.72□□□□□ -1.97
CLPTM1O96005 MTND4P7-201ENST00000523876 130 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
CLPTM1O96005 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.72□□□□□ -1.97
CLPTM1O96005 AC078814.3-201ENST00000553036 491 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.72□□□□□ -1.97
CLPTM1O96005 AC012493.2-201ENST00000595083 291 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 RNU6-89P-201ENST00000606519 100 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.72□□□□□ -1.97
CLPTM1O96005 AC107294.1-201ENST00000609524 467 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 DUSP12P1-201ENST00000612874 516 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 AP003400.5-201ENST00000624827 617 ntBASIC2.72□□□□□ -1.97
CLPTM1O96005 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CLPTM1O96005 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CLPTM1O96005 Y_RNA.157-201ENST00000363638 102 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 RNU5E-4P-201ENST00000364931 120 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 SNORA9-201ENST00000384215 133 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 SNORD70.1-201ENST00000391007 85 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 AL162578.1-201ENST00000406202 378 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
CLPTM1O96005 RNU6-1148P-201ENST00000410992 104 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 RNU6-373P-201ENST00000411247 98 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 RPL21P111-201ENST00000418453 477 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.71□□□□□ -1.98
CLPTM1O96005 SRIP2-201ENST00000428470 166 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 GPM6BP2-201ENST00000432046 144 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.71□□□□□ -1.98
CLPTM1O96005 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.71□□□□□ -1.98
CLPTM1O96005 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 GPM6BP1-201ENST00000446387 144 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 CECR9-201ENST00000453421 199 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 FABP5P15-201ENST00000453566 214 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.71□□□□□ -1.98
CLPTM1O96005 RPL30P5-201ENST00000494923 336 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.71□□□□□ -1.98
CLPTM1O96005 RNA5SP291-201ENST00000517222 105 ntBASIC2.71□□□□□ -1.98
CLPTM1O96005 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms