Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNU2-3P-201ENST00000410144 191 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 CYCSP33-201ENST00000414485 327 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 RPL7P10-201ENST00000417407 739 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.68□□□□□ -1.82
CTNND1O60716 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.68□□□□□ -1.82
CTNND1O60716 HMGB1P9-201ENST00000429856 646 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.68□□□□□ -1.82
CTNND1O60716 RN7SL330P-201ENST00000469709 307 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 AP000852.1-201ENST00000472460 573 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 RPS29P20-201ENST00000489592 171 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 AC010486.1-201ENST00000511793 424 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 RNU1-86P-201ENST00000516108 154 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 RNU1-107P-201ENST00000516617 154 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 SNORA20.3-201ENST00000516880 132 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 MIR2276-201ENST00000516886 89 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 RNU6-1183P-201ENST00000517054 60 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 RPL7P20-201ENST00000520308 745 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.68□□□□□ -1.82
CTNND1O60716 PSMA3P-201ENST00000555485 635 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 MIR3186-201ENST00000577404 85 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 MIR5047-201ENST00000579212 100 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.68□□□□□ -1.82
CTNND1O60716 AL161629.2-201ENST00000615347 275 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 RMST_4.1-201ENST00000616886 107 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.68□□□□□ -1.82
CTNND1O60716 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.68□□□□□ -1.82
CTNND1O60716 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTNND1O60716 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
CTNND1O60716 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTNND1O60716 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTNND1O60716 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTNND1O60716 Y_RNA.72-201ENST00000362894 103 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 SNORA5B-201ENST00000363786 132 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
CTNND1O60716 EIF4E2P1-201ENST00000393781 255 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 RPLP0P7-201ENST00000416050 667 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.67□□□□□ -1.82
CTNND1O60716 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.67□□□□□ -1.82
CTNND1O60716 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.67□□□□□ -1.82
CTNND1O60716 HIGD1AP11-201ENST00000438361 280 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.67□□□□□ -1.82
CTNND1O60716 AL031183.1-201ENST00000457667 207 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 RNU7-23P-201ENST00000459465 62 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 AC011005.2-201ENST00000487324 359 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 AC083904.1-201ENST00000487828 231 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 RPS27AP10-201ENST00000496103 208 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 SNORA14.1-201ENST00000516113 141 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 CYCSP27-201ENST00000527643 293 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.67□□□□□ -1.82
CTNND1O60716 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.67□□□□□ -1.82
CTNND1O60716 LINC00933-203ENST00000559812 219 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 AC011712.1-201ENST00000588959 234 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.67□□□□□ -1.82
CTNND1O60716 ATP1B3P1-201ENST00000605365 821 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 AC093908.1-201ENST00000623125 8092 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CTNND1O60716 AC000403.1-201ENST00000613696 3585 ntBASIC3.67□□□□□ -1.82
CTNND1O60716 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.67□□□□□ -1.82
CTNND1O60716 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNND1O60716 RNU6-1303P-201ENST00000364841 107 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 RNU6-384P-201ENST00000364900 104 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 Y_RNA.530-201ENST00000384587 101 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNND1O60716 RPL21P111-201ENST00000418453 477 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 AL645937.1-202ENST00000421799 937 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 BPY2DP-201ENST00000422208 265 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.66□□□□□ -1.82
CTNND1O60716 AL513185.2-201ENST00000425543 193 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.66□□□□□ -1.82
CTNND1O60716 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNND1O60716 MTCO2P3-201ENST00000442543 421 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNND1O60716 AC128713.1-201ENST00000471495 306 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 MTCO2P30-201ENST00000503662 364 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 FAM206BP-201ENST00000510179 541 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 TBCAP3-201ENST00000512475 312 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.66□□□□□ -1.82
CTNND1O60716 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 SNORD59.2-201ENST00000516873 68 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 RNU6-1314P-201ENST00000517139 104 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTNND1O60716 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNND1O60716 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.66□□□□□ -1.82
CTNND1O60716 AL121579.1-201ENST00000555129 305 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 CYCSP39-201ENST00000565821 309 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 BNIP3P25-201ENST00000596023 559 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 AC092628.2-201ENST00000622492 339 ntBASIC3.66□□□□□ -1.82
CTNND1O60716 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTNND1O60716 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CTNND1O60716 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CTNND1O60716 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNND1O60716 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTNND1O60716 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.66□□□□□ -1.82
CTNND1O60716 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.66□□□□□ -1.82
CTNND1O60716 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CTNND1O60716 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTNND1O60716 SNORD14B-201ENST00000364533 90 ntBASIC3.65□□□□□ -1.83
CTNND1O60716 SNORA14A-201ENST00000364773 135 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms