Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSX4O60224 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSX4O60224 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSX4O60224 AC108206.1-201ENST00000570186 4159 ntBASIC2.75□□□□□ -1.97
SSX4O60224 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
SSX4O60224 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.74□□□□□ -1.97
SSX4O60224 RNU6-384P-201ENST00000364900 104 ntBASIC2.74□□□□□ -1.97
SSX4O60224 Y_RNA.500-201ENST00000384466 111 ntBASIC2.74□□□□□ -1.97
SSX4O60224 RNU6-393P-201ENST00000384475 107 ntBASIC2.74□□□□□ -1.97
SSX4O60224 MIR518D-201ENST00000385014 87 ntBASIC2.74□□□□□ -1.97
SSX4O60224 SNORD37.1-201ENST00000390968 65 ntBASIC2.74□□□□□ -1.97
SSX4O60224 SNORA16.2-201ENST00000390991 127 ntBASIC2.74□□□□□ -1.97
SSX4O60224 RNU6-648P-201ENST00000410190 107 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.74□□□□□ -1.97
SSX4O60224 RPL7P10-201ENST00000417407 739 ntBASIC2.74□□□□□ -1.97
SSX4O60224 USP9YP27-201ENST00000418455 438 ntBASIC2.74□□□□□ -1.97
SSX4O60224 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX4O60224 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX4O60224 RPS29P6-201ENST00000438196 145 ntBASIC2.74□□□□□ -1.97
SSX4O60224 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
SSX4O60224 NDUFB1P2-201ENST00000449477 176 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX4O60224 BTF3P15-201ENST00000455606 336 ntBASIC2.74□□□□□ -1.97
SSX4O60224 HMGB1P30-201ENST00000492455 606 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.74□□□□□ -1.97
SSX4O60224 RNU6-581P-201ENST00000516214 105 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AP003033.1-201ENST00000527244 415 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX4O60224 AP002404.1-201ENST00000532005 451 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX4O60224 AL121821.2-201ENST00000556081 394 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC092325.1-201ENST00000566449 554 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC005498.1-201ENST00000592125 465 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC005261.5-201ENST00000596280 355 ntBASIC2.74□□□□□ -1.97
SSX4O60224 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.74□□□□□ -1.97
SSX4O60224 uc_338.34-201ENST00000617467 174 ntBASIC2.74□□□□□ -1.97
SSX4O60224 MIR6134-201ENST00000617606 109 ntBASIC2.74□□□□□ -1.97
SSX4O60224 UCA1.1-201ENST00000620952 75 ntBASIC2.74□□□□□ -1.97
SSX4O60224 YWHAEP7-203ENST00000622054 312 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC005858.4-201ENST00000623191 700 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.74□□□□□ -1.97
SSX4O60224 AC018692.3-201ENST00000623929 123 ntBASIC2.74□□□□□ -1.97
SSX4O60224 MIR1321-201ENST00000637766 79 ntBASIC2.74□□□□□ -1.97
SSX4O60224 AL355596.1-201ENST00000565399 3996 ntBASIC2.74□□□□□ -1.97
SSX4O60224 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSX4O60224 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.74□□□□□ -1.97
SSX4O60224 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSX4O60224 AC010889.1-201ENST00000566193 2666 ntBASIC2.73□□□□□ -1.97
SSX4O60224 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX4O60224 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SSX4O60224 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX4O60224 Y_RNA.9-201ENST00000362354 101 ntBASIC2.73□□□□□ -1.97
SSX4O60224 RNU1-140P-201ENST00000365040 165 ntBASIC2.73□□□□□ -1.97
SSX4O60224 RNU4-12P-201ENST00000365233 139 ntBASIC2.73□□□□□ -1.97
SSX4O60224 Y_RNA.402-201ENST00000383972 102 ntBASIC2.73□□□□□ -1.97
SSX4O60224 RNU6-434P-201ENST00000384376 107 ntBASIC2.73□□□□□ -1.97
SSX4O60224 MIR10A-201ENST00000385043 110 ntBASIC2.73□□□□□ -1.97
SSX4O60224 RNU6-750P-201ENST00000390946 107 ntBASIC2.73□□□□□ -1.97
SSX4O60224 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSX4O60224 RPS4XP7-201ENST00000406274 780 ntBASIC2.73□□□□□ -1.97
SSX4O60224 FCF1P9-201ENST00000412546 282 ntBASIC2.73□□□□□ -1.97
SSX4O60224 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.73□□□□□ -1.97
SSX4O60224 AC016831.2-201ENST00000417179 352 ntBASIC2.73□□□□□ -1.97
SSX4O60224 MTCO1P20-201ENST00000425366 358 ntBASIC2.73□□□□□ -1.97
SSX4O60224 SEPT14P3-201ENST00000439401 183 ntBASIC2.73□□□□□ -1.97
SSX4O60224 AL732372.2-207ENST00000445840 183 ntBASIC2.73□□□□□ -1.97
SSX4O60224 AC092001.1-201ENST00000453012 261 ntBASIC2.73□□□□□ -1.97
SSX4O60224 SEPT14P2-201ENST00000453405 183 ntBASIC2.73□□□□□ -1.97
SSX4O60224 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.73□□□□□ -1.97
SSX4O60224 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSX4O60224 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSX4O60224 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.73□□□□□ -1.97
SSX4O60224 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
SSX4O60224 AC074344.1-201ENST00000512823 224 ntBASIC2.73□□□□□ -1.97
SSX4O60224 SEPT14P4-201ENST00000513445 186 ntBASIC2.73□□□□□ -1.97
SSX4O60224 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX4O60224 RNU2-69P-201ENST00000516061 100 ntBASIC2.73□□□□□ -1.97
SSX4O60224 FO082796.1-201ENST00000523795 183 ntBASIC2.73□□□□□ -1.97
SSX4O60224 MTND4P7-201ENST00000523876 130 ntBASIC2.73□□□□□ -1.97
SSX4O60224 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX4O60224 AC136619.2-201ENST00000563361 631 ntBASIC2.73□□□□□ -1.97
SSX4O60224 AC234778.2-201ENST00000566241 354 ntBASIC2.73□□□□□ -1.97
SSX4O60224 MIR4424-201ENST00000585257 86 ntBASIC2.73□□□□□ -1.97
SSX4O60224 ATP5A1P2-202ENST00000616464 443 ntBASIC2.73□□□□□ -1.97
SSX4O60224 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX4O60224 AP003400.5-201ENST00000624827 617 ntBASIC2.73□□□□□ -1.97
SSX4O60224 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX4O60224 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX4O60224 AC099654.7-201ENST00000635788 2127 ntBASIC2.72□□□□□ -1.97
SSX4O60224 CDC27P3-201ENST00000635418 1910 ntBASIC2.72□□□□□ -1.97
SSX4O60224 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SSX4O60224 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SSX4O60224 RNU6-1303P-201ENST00000364841 107 ntBASIC2.72□□□□□ -1.97
SSX4O60224 RNU2-3P-201ENST00000410144 191 ntBASIC2.72□□□□□ -1.97
SSX4O60224 RNU6-908P-201ENST00000410160 94 ntBASIC2.72□□□□□ -1.97
SSX4O60224 RNU6-1068P-201ENST00000410958 103 ntBASIC2.72□□□□□ -1.97
SSX4O60224 RNU6-607P-201ENST00000411283 108 ntBASIC2.72□□□□□ -1.97
SSX4O60224 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
SSX4O60224 PGBD4P6-201ENST00000421501 610 ntBASIC2.72□□□□□ -1.97
SSX4O60224 RPL7P37-201ENST00000425095 738 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms