Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.19□□□□□ -2.06
RIPK2O43353 AL590365.1-201ENST00000450788 243 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 AL109933.2-201ENST00000452651 260 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 AC011005.2-201ENST00000487324 359 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.19□□□□□ -2.06
RIPK2O43353 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.19□□□□□ -2.06
RIPK2O43353 RNA5SP200-201ENST00000516360 103 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 SNORA48.11-201ENST00000517015 89 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 RNU6-201P-201ENST00000517100 61 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.19□□□□□ -2.06
RIPK2O43353 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.19□□□□□ -2.06
RIPK2O43353 AF131215.7-201ENST00000602443 707 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 AC096772.1-201ENST00000609146 564 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 AC092140.2-201ENST00000618027 521 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.19□□□□□ -2.06
RIPK2O43353 Z99571.1-201ENST00000636677 394 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 AC099654.13-201ENST00000639774 207 ntBASIC2.19□□□□□ -2.06
RIPK2O43353 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.19□□□□□ -2.06
RIPK2O43353 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RIPK2O43353 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.18□□□□□ -2.06
RIPK2O43353 RNU6-288P-201ENST00000363690 104 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 RNU5F-7P-201ENST00000363696 115 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 RNU5E-5P-201ENST00000365379 116 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RIPK2O43353 SNORA40.19-201ENST00000390846 128 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 SNORD115.1-201ENST00000391109 76 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RIPK2O43353 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RIPK2O43353 AL512604.1-201ENST00000404812 257 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 NDUFB4P4-201ENST00000404822 243 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.18□□□□□ -2.06
RIPK2O43353 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.18□□□□□ -2.06
RIPK2O43353 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.18□□□□□ -2.06
RIPK2O43353 AC090960.1-201ENST00000421072 306 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AL356583.2-201ENST00000426536 280 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.18□□□□□ -2.06
RIPK2O43353 AL591704.1-201ENST00000432574 275 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.18□□□□□ -2.06
RIPK2O43353 MTND2P4-201ENST00000445034 1004 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.18□□□□□ -2.06
RIPK2O43353 SNORA25.11-201ENST00000515935 105 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 RNU4-29P-201ENST00000515943 174 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AC022616.6-201ENST00000520479 119 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AC025755.1-201ENST00000521306 278 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
RIPK2O43353 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.18□□□□□ -2.06
RIPK2O43353 AC110760.3-201ENST00000598794 467 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AL109918.3-201ENST00000603072 338 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AC012360.2-201ENST00000609349 391 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AC138749.5-201ENST00000611461 208 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AL365204.3-201ENST00000612448 685 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AC116165.2-201ENST00000616705 206 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AL512643.1-201ENST00000635735 524 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 MTND5P42-201ENST00000637720 498 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.18□□□□□ -2.06
RIPK2O43353 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.18□□□□□ -2.06
RIPK2O43353 MTND4P4-201ENST00000439033 1366 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 AP006437.1-201ENST00000641440 3685 ntBASIC2.18□□□□□ -2.06
RIPK2O43353 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RIPK2O43353 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RIPK2O43353 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RIPK2O43353 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
RIPK2O43353 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RIPK2O43353 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.17□□□□□ -2.06
RIPK2O43353 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RIPK2O43353 RNU6-898P-201ENST00000365627 104 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RIPK2O43353 SNORA48.2-201ENST00000390926 124 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 HMGN2P39-201ENST00000398005 273 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 Y_RNA.608-201ENST00000410647 95 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 RNA5SP184-201ENST00000411071 108 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.17□□□□□ -2.06
RIPK2O43353 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.17□□□□□ -2.06
RIPK2O43353 AC025750.2-201ENST00000442609 450 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AL078601.1-201ENST00000444542 271 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.17□□□□□ -2.06
RIPK2O43353 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.17□□□□□ -2.06
RIPK2O43353 AC140059.1-201ENST00000489238 361 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AC112204.1-201ENST00000502591 103 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.17□□□□□ -2.06
RIPK2O43353 FABP5P5-201ENST00000515537 406 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 RNA5SP356-201ENST00000515972 94 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.17□□□□□ -2.06
RIPK2O43353 AC107934.1-201ENST00000522215 217 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 FAM92A1P1-201ENST00000528023 890 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AP003122.4-201ENST00000530980 758 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.17□□□□□ -2.06
RIPK2O43353 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.17□□□□□ -2.06
RIPK2O43353 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.17□□□□□ -2.06
RIPK2O43353 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.17□□□□□ -2.06
RIPK2O43353 AC174048.1-201ENST00000603389 144 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 Z94722.1-201ENST00000604328 474 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AC135507.2-201ENST00000612443 309 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.17□□□□□ -2.06
RIPK2O43353 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms