Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.44□□□□□ -2.02
PHF1O43189 BNIP3P2-201ENST00000441221 577 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.44□□□□□ -2.02
PHF1O43189 AC009237.8-201ENST00000445492 379 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AL732372.2-207ENST00000445840 183 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AL118520.1-201ENST00000450770 291 ntBASIC2.44□□□□□ -2.02
PHF1O43189 SEPT14P2-201ENST00000453405 183 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.44□□□□□ -2.02
PHF1O43189 AL162395.1-201ENST00000457882 422 ntBASIC2.44□□□□□ -2.02
PHF1O43189 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.44□□□□□ -2.02
PHF1O43189 RPS27AP9-201ENST00000477681 438 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.44□□□□□ -2.02
PHF1O43189 HIGD1AP13-201ENST00000509878 289 ntBASIC2.44□□□□□ -2.02
PHF1O43189 SEPT14P4-201ENST00000513445 186 ntBASIC2.44□□□□□ -2.02
PHF1O43189 RNU6-677P-201ENST00000516914 101 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.44□□□□□ -2.02
PHF1O43189 FO082796.1-201ENST00000523795 183 ntBASIC2.44□□□□□ -2.02
PHF1O43189 ATP5F1P5-201ENST00000526403 760 ntBASIC2.44□□□□□ -2.02
PHF1O43189 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.44□□□□□ -2.02
PHF1O43189 OR5AL2P-201ENST00000532185 920 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AP000867.2-201ENST00000532468 320 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.44□□□□□ -2.02
PHF1O43189 TRAV28-201ENST00000557548 323 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AC234778.2-201ENST00000566241 354 ntBASIC2.44□□□□□ -2.02
PHF1O43189 RPL23AP78-201ENST00000599928 470 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AL161798.1-201ENST00000604630 131 ntBASIC2.44□□□□□ -2.02
PHF1O43189 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.44□□□□□ -2.02
PHF1O43189 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
PHF1O43189 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.44□□□□□ -2.02
PHF1O43189 AC002553.4-201ENST00000616896 331 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AL590808.1-201ENST00000618696 141 ntBASIC2.44□□□□□ -2.02
PHF1O43189 YWHAEP7-203ENST00000622054 312 ntBASIC2.44□□□□□ -2.02
PHF1O43189 MIR6733-201ENST00000635723 61 ntBASIC2.44□□□□□ -2.02
PHF1O43189 AC007785.2-201ENST00000598627 1916 ntBASIC2.44□□□□□ -2.02
PHF1O43189 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PHF1O43189 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
PHF1O43189 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PHF1O43189 AL354685.2-201ENST00000448218 1447 ntBASIC2.43□□□□□ -2.02
PHF1O43189 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
PHF1O43189 RNU1-35P-201ENST00000362782 153 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RNU6-1167P-201ENST00000363227 94 ntBASIC2.43□□□□□ -2.02
PHF1O43189 SNORD56.5-201ENST00000364281 72 ntBASIC2.43□□□□□ -2.02
PHF1O43189 SNORD21-201ENST00000383953 95 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RNU6-190P-201ENST00000384154 102 ntBASIC2.43□□□□□ -2.02
PHF1O43189 Y_RNA.453-201ENST00000384223 109 ntBASIC2.43□□□□□ -2.02
PHF1O43189 Y_RNA.573-201ENST00000384763 105 ntBASIC2.43□□□□□ -2.02
PHF1O43189 MIR514A2-201ENST00000385131 88 ntBASIC2.43□□□□□ -2.02
PHF1O43189 MIR514A3-201ENST00000385132 88 ntBASIC2.43□□□□□ -2.02
PHF1O43189 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PHF1O43189 AL591416.1-201ENST00000404015 867 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RPS12P24-201ENST00000412619 387 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AC092809.3-201ENST00000415453 231 ntBASIC2.43□□□□□ -2.02
PHF1O43189 MTND1P23-201ENST00000416931 372 ntBASIC2.43□□□□□ -2.02
PHF1O43189 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.43□□□□□ -2.02
PHF1O43189 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.43□□□□□ -2.02
PHF1O43189 GTF2IP20-201ENST00000431663 360 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AL591704.1-201ENST00000432574 275 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AC087499.2-201ENST00000432861 149 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RPL39P40-201ENST00000445481 146 ntBASIC2.43□□□□□ -2.02
PHF1O43189 FABP5P15-201ENST00000453566 214 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RPS29P15-201ENST00000458329 171 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RNU6-953P-201ENST00000459154 107 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RNU7-180P-201ENST00000459240 63 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AL135752.1-201ENST00000479477 471 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RPL39P36-201ENST00000490784 156 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.43□□□□□ -2.02
PHF1O43189 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.43□□□□□ -2.02
PHF1O43189 RNA5SP471-201ENST00000516971 106 ntBASIC2.43□□□□□ -2.02
PHF1O43189 RNA5SP503-201ENST00000517047 117 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.43□□□□□ -2.02
PHF1O43189 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.43□□□□□ -2.02
PHF1O43189 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.43□□□□□ -2.02
PHF1O43189 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PHF1O43189 AP002770.2-201ENST00000543613 532 ntBASIC2.43□□□□□ -2.02
PHF1O43189 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.43□□□□□ -2.02
PHF1O43189 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.43□□□□□ -2.02
PHF1O43189 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.43□□□□□ -2.02
PHF1O43189 AC010620.2-201ENST00000600135 313 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AC098826.3-201ENST00000603823 466 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AC010338.1-201ENST00000621823 717 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AC024940.5-201ENST00000622889 474 ntBASIC2.43□□□□□ -2.02
PHF1O43189 AC022336.2-201ENST00000568966 2538 ntBASIC2.43□□□□□ -2.02
PHF1O43189 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PHF1O43189 Z82195.2-201ENST00000612348 18351 ntBASIC2.42□□□□□ -2.02
PHF1O43189 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PHF1O43189 RNU6-550P-201ENST00000391057 101 ntBASIC2.42□□□□□ -2.02
PHF1O43189 RNU6-1197P-201ENST00000391183 107 ntBASIC2.42□□□□□ -2.02
PHF1O43189 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PHF1O43189 RNU4-46P-201ENST00000410818 138 ntBASIC2.42□□□□□ -2.02
PHF1O43189 RPL19P1-201ENST00000411635 428 ntBASIC2.42□□□□□ -2.02
PHF1O43189 MTCYBP8-201ENST00000422855 651 ntBASIC2.42□□□□□ -2.02
PHF1O43189 TOMM20P4-201ENST00000427861 435 ntBASIC2.42□□□□□ -2.02
PHF1O43189 CALM2P2-201ENST00000428512 440 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AL590383.1-201ENST00000428602 75 ntBASIC2.42□□□□□ -2.02
PHF1O43189 AL139415.2-201ENST00000431968 163 ntBASIC2.42□□□□□ -2.02
PHF1O43189 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.42□□□□□ -2.02
PHF1O43189 RPS29P6-201ENST00000438196 145 ntBASIC2.42□□□□□ -2.02
PHF1O43189 Z82210.1-201ENST00000440037 231 ntBASIC2.42□□□□□ -2.02
PHF1O43189 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.42□□□□□ -2.02
PHF1O43189 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms