Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AP000787.2-201ENST00000604432 568 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.43□□□□□ -1.86
PHGDHO43175 AC011890.2-201ENST00000613393 294 ntBASIC3.43□□□□□ -1.86
PHGDHO43175 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.43□□□□□ -1.86
PHGDHO43175 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PHGDHO43175 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PHGDHO43175 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PHGDHO43175 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PHGDHO43175 Y_RNA.58-201ENST00000362807 102 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 Y_RNA.126-201ENST00000363382 111 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 Y_RNA.154-201ENST00000363624 102 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 SNORA14A-201ENST00000364773 135 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RNY3P1-201ENST00000365085 102 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RNU6-1280P-201ENST00000365211 107 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RNY3-201ENST00000365484 102 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PHGDHO43175 Y_RNA.490-201ENST00000384413 102 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RNU6-1106P-201ENST00000390845 107 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RNU6-328P-201ENST00000390887 106 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AL360182.1-201ENST00000397433 468 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RAB9AP3-201ENST00000412737 573 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AL445584.1-201ENST00000431451 330 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.42□□□□□ -1.86
PHGDHO43175 NOTCH2P1-201ENST00000443481 624 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 UBE2V1P7-201ENST00000446395 340 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AC125238.1-201ENST00000448842 249 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 MTND1P17-201ENST00000448961 204 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RAB9AP1-201ENST00000449393 573 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.42□□□□□ -1.86
PHGDHO43175 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.42□□□□□ -1.86
PHGDHO43175 RPS27P27-201ENST00000498779 255 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.42□□□□□ -1.86
PHGDHO43175 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.42□□□□□ -1.86
PHGDHO43175 RNU6-581P-201ENST00000516214 105 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RNU6-277P-201ENST00000516272 106 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 SNORD59.2-201ENST00000516873 68 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 HPRT1P3-201ENST00000539521 576 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AL121821.2-201ENST00000556081 394 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.42□□□□□ -1.86
PHGDHO43175 AL355375.2-201ENST00000574825 175 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AC245389.1-201ENST00000605141 529 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AC064836.2-201ENST00000609491 462 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AC092628.2-201ENST00000622492 339 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 AC034229.5-201ENST00000624258 185 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PHGDHO43175 AC032011.1-201ENST00000611703 1549 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 CDC27P3-201ENST00000635418 1910 ntBASIC3.42□□□□□ -1.86
PHGDHO43175 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
PHGDHO43175 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.42□□□□□ -1.86
PHGDHO43175 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PHGDHO43175 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 RNU1-75P-201ENST00000347264 129 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 Y_RNA.813-201ENST00000364639 102 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 RNU1-100P-201ENST00000365255 165 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
PHGDHO43175 RNU6-95P-201ENST00000384697 107 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AC023141.4-201ENST00000412031 328 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 Z99755.1-201ENST00000414048 380 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.41□□□□□ -1.86
PHGDHO43175 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.41□□□□□ -1.86
PHGDHO43175 RPS3AP52-201ENST00000435639 297 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.41□□□□□ -1.86
PHGDHO43175 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.41□□□□□ -1.86
PHGDHO43175 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PHGDHO43175 NIPA2P5-201ENST00000452282 464 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AC006026.2-201ENST00000457376 180 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 CENPBD1P1-201ENST00000464061 469 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.41□□□□□ -1.86
PHGDHO43175 MTND5P5-201ENST00000503764 376 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 RN7SKP24-201ENST00000515888 284 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AC109479.2-201ENST00000517842 174 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AC107934.2-201ENST00000518653 310 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.41□□□□□ -1.86
PHGDHO43175 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.41□□□□□ -1.86
PHGDHO43175 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.41□□□□□ -1.86
PHGDHO43175 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.41□□□□□ -1.86
PHGDHO43175 AC006199.1-201ENST00000548728 219 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.41□□□□□ -1.86
PHGDHO43175 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.41□□□□□ -1.86
PHGDHO43175 AC113139.1-201ENST00000605049 239 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AL121917.1-203ENST00000605534 577 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 MIR8058-201ENST00000615737 89 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PHGDHO43175 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 AC006026.1-201ENST00000444025 1803 ntBASIC3.41□□□□□ -1.86
PHGDHO43175 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.41□□□□□ -1.86
PHGDHO43175 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
PHGDHO43175 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
PHGDHO43175 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PHGDHO43175 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PHGDHO43175 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PHGDHO43175 RNU6-78P-201ENST00000362897 107 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 Y_RNA.339-201ENST00000365325 102 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 RNU6-827P-201ENST00000365553 106 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 Y_RNA.474-201ENST00000384341 102 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 MIR554-201ENST00000384874 96 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 RNU1-101P-201ENST00000391171 127 ntBASIC3.4□□□□□ -1.87
PHGDHO43175 EI24P2-201ENST00000397776 1076 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms