Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UBFD1O14562 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBFD1O14562 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UBFD1O14562 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
UBFD1O14562 CDC27P3-201ENST00000635418 1910 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 Y_RNA.355-201ENST00000365462 98 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 SNORD116.1-201ENST00000365628 92 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.37□□□□□ -2.19
UBFD1O14562 AC068050.1-201ENST00000394891 380 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 MIR320C1-201ENST00000408566 88 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.37□□□□□ -2.19
UBFD1O14562 AC104651.1-201ENST00000427559 735 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.37□□□□□ -2.19
UBFD1O14562 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.37□□□□□ -2.19
UBFD1O14562 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.37□□□□□ -2.19
UBFD1O14562 RPS15AP9-201ENST00000439856 381 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 PAXBP1P1-201ENST00000449315 447 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.37□□□□□ -2.19
UBFD1O14562 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AC112771.1-201ENST00000463581 102 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.37□□□□□ -2.19
UBFD1O14562 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.37□□□□□ -2.19
UBFD1O14562 MTCYBP35-201ENST00000503630 1137 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UBFD1O14562 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.37□□□□□ -2.19
UBFD1O14562 SNORA4.4-201ENST00000515921 135 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.37□□□□□ -2.19
UBFD1O14562 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.37□□□□□ -2.19
UBFD1O14562 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.37□□□□□ -2.19
UBFD1O14562 MIR4285-201ENST00000581001 85 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.37□□□□□ -2.19
UBFD1O14562 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.37□□□□□ -2.19
UBFD1O14562 MTCYBP22-201ENST00000603788 447 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 MTND3P19-201ENST00000603825 345 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AL355598.1-201ENST00000604169 202 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AC245297.2-201ENST00000610119 565 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 U4atac.1-201ENST00000618345 95 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AC006386.1-201ENST00000619436 415 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AL589994.2-201ENST00000621124 579 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 AC099654.9-201ENST00000637055 678 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 U6.99-201ENST00000637524 83 ntBASIC1.37□□□□□ -2.19
UBFD1O14562 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
UBFD1O14562 U8.1-201ENST00000362843 134 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 Y_RNA.192-201ENST00000363977 102 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 RNU6-1257P-201ENST00000384625 110 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 ERHP2-201ENST00000402323 299 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AL591034.2-201ENST00000402839 359 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AL136310.1-201ENST00000404926 654 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.36□□□□□ -2.19
UBFD1O14562 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.36□□□□□ -2.19
UBFD1O14562 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.36□□□□□ -2.19
UBFD1O14562 HSPE1P21-201ENST00000438283 308 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 snoU109.1-201ENST00000459339 135 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC104982.1-201ENST00000478775 574 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC018868.1-201ENST00000491307 315 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC016550.1-201ENST00000505348 785 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC116655.1-201ENST00000508324 901 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
UBFD1O14562 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
UBFD1O14562 AC091163.3-201ENST00000518269 1144 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC009902.1-201ENST00000519351 183 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AP006587.4-201ENST00000526053 529 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AP005639.2-201ENST00000527592 928 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 MRPS36P5-201ENST00000551909 298 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.36□□□□□ -2.19
UBFD1O14562 MIR3126-201ENST00000577443 74 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 SEPT7P9-203ENST00000604116 343 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.36□□□□□ -2.19
UBFD1O14562 AC092574.1-201ENST00000609771 420 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.36□□□□□ -2.19
UBFD1O14562 AP003476.1-201ENST00000623984 516 ntBASIC1.36□□□□□ -2.19
UBFD1O14562 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.35□□□□□ -2.19
UBFD1O14562 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBFD1O14562 Y_RNA.116-201ENST00000363292 103 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 U3.13-201ENST00000364804 214 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
UBFD1O14562 RNU6-701P-201ENST00000384059 107 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 RNU6-1032P-201ENST00000384100 107 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 RNU6-413P-201ENST00000384115 107 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 SNORA40.4-201ENST00000390971 128 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 HMGN2P39-201ENST00000398005 273 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 NDUFS5P1-201ENST00000405668 289 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AL160275.3-201ENST00000423876 471 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.35□□□□□ -2.19
UBFD1O14562 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.35□□□□□ -2.19
UBFD1O14562 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.35□□□□□ -2.19
UBFD1O14562 AC009238.1-201ENST00000442165 424 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AC009237.6-201ENST00000446969 424 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
UBFD1O14562 AL137159.1-201ENST00000452808 512 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.35□□□□□ -2.19
UBFD1O14562 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 RNU7-59P-201ENST00000459101 61 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.35□□□□□ -2.19
UBFD1O14562 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.35□□□□□ -2.19
UBFD1O14562 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms