Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC007547.1-201ENST00000462177 490 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 RN7SL601P-201ENST00000471221 293 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 TRBV1-201ENST00000476502 284 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM38O00635 AC104806.1-201ENST00000508720 308 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AC093303.1-201ENST00000514549 295 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 Y_RNA.665-201ENST00000516177 98 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 RNU6-1315P-201ENST00000517187 99 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.54□□□□□ -1.84
TRIM38O00635 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM38O00635 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM38O00635 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM38O00635 AC011471.1-201ENST00000585766 187 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AL512605.2-201ENST00000592972 256 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AL109918.3-201ENST00000603072 338 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AC005000.2-201ENST00000605468 310 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 RNU6-89P-201ENST00000606519 100 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.54□□□□□ -1.84
TRIM38O00635 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AL355365.1-201ENST00000616480 294 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AC073308.1-201ENST00000623696 305 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AL512643.1-201ENST00000635735 524 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 AL732372.2-225ENST00000642124 456 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRIM38O00635 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.54□□□□□ -1.84
TRIM38O00635 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.54□□□□□ -1.84
TRIM38O00635 AC233263.6-201ENST00000631132 1963 ntBASIC3.54□□□□□ -1.84
TRIM38O00635 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM38O00635 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM38O00635 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM38O00635 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM38O00635 RNU1-33P-201ENST00000364249 162 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 Y_RNA.301-201ENST00000364990 103 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 Y_RNA.339-201ENST00000365325 102 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 RNU6-996P-201ENST00000365438 107 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 MT-TG-201ENST00000387429 68 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TRIM38O00635 CISD1P1-201ENST00000393907 327 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 RNU6-55P-201ENST00000411092 107 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 RNU6-954P-201ENST00000411355 107 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 OR6C66P-201ENST00000414917 930 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 DBIP2-201ENST00000419076 262 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM38O00635 AC073415.1-201ENST00000449240 153 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 CECR9-201ENST00000453421 199 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 RPL21P10-201ENST00000463521 490 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 RPL21P8-201ENST00000465083 535 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 MTATP8P1-201ENST00000467115 207 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC006512.1-201ENST00000468816 291 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AL163973.1-201ENST00000484753 577 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 HMGB1P30-201ENST00000492455 606 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC026801.1-201ENST00000497178 464 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM38O00635 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 RN7SKP57-201ENST00000517248 293 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM38O00635 APOOP3-201ENST00000536787 586 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 BNIP3P6-201ENST00000549284 499 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM38O00635 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM38O00635 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM38O00635 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM38O00635 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM38O00635 AL138889.2-201ENST00000603883 242 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC004805.2-201ENST00000605382 482 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AL158032.1-201ENST00000605401 106 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC092807.2-201ENST00000609367 243 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 DUSP12P1-201ENST00000612874 516 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 uc_338.15-201ENST00000615470 191 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 AC099506.2-201ENST00000623074 221 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 Z99571.1-201ENST00000636677 394 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
TRIM38O00635 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM38O00635 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM38O00635 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TRIM38O00635 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM38O00635 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TRIM38O00635 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
TRIM38O00635 GABRG2-229ENST00000641017 3628 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM38O00635 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
TRIM38O00635 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM38O00635 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM38O00635 RNU6-1287P-201ENST00000362914 107 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 Y_RNA.148-201ENST00000363557 117 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 RNU6-270P-201ENST00000364131 105 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AP002088.1-201ENST00000382740 395 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 RNU6-1222P-201ENST00000384615 107 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 RNU6-1060P-201ENST00000384664 107 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRIM38O00635 RNU6-550P-201ENST00000391057 101 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 AL603908.1-201ENST00000406098 201 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM38O00635 AL160275.3-201ENST00000423876 471 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 RPL7P46-201ENST00000425129 740 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 ERLEC1P1-201ENST00000433806 578 ntBASIC3.52□□□□□ -1.85
TRIM38O00635 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM38O00635 AC008264.1-201ENST00000447612 367 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms