Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK1AO00322 AC138627.2-201ENST00000624202 601 ntBASIC1.58□□□□□ -2.16
UPK1AO00322 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK1AO00322 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.58□□□□□ -2.16
UPK1AO00322 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
UPK1AO00322 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.57□□□□□ -2.16
UPK1AO00322 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.57□□□□□ -2.16
UPK1AO00322 RNU6-858P-201ENST00000362436 107 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 MIR561-201ENST00000385216 97 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 MIR1289-2-201ENST00000408360 111 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK1AO00322 AC009518.2-201ENST00000418056 731 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK1AO00322 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.57□□□□□ -2.16
UPK1AO00322 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.57□□□□□ -2.16
UPK1AO00322 IFNA20P-201ENST00000436840 528 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 AC093899.1-201ENST00000457984 376 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK1AO00322 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.57□□□□□ -2.16
UPK1AO00322 SNORA4.4-201ENST00000515921 135 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UPK1AO00322 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UPK1AO00322 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UPK1AO00322 AL031274.2-201ENST00000599419 203 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 AC107952.2-201ENST00000606048 486 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 RNU6-91P-201ENST00000607774 107 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 AL365204.3-201ENST00000612448 685 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 MTND5P42-201ENST00000637720 498 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 MTND4P16-201ENST00000466108 1367 ntBASIC1.57□□□□□ -2.16
UPK1AO00322 RNU2-36P-201ENST00000410361 191 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 RNU6-1025P-201ENST00000410629 104 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 RPS20P15-201ENST00000412792 311 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK1AO00322 MTCO2P21-201ENST00000419780 677 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AL358453.1-201ENST00000422522 250 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 XKRYP1-201ENST00000423438 492 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK1AO00322 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.56□□□□□ -2.16
UPK1AO00322 XKRYP2-201ENST00000432915 492 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK1AO00322 AL139824.2-201ENST00000458731 1095 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.56□□□□□ -2.16
UPK1AO00322 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.56□□□□□ -2.16
UPK1AO00322 RNU5B-3P-201ENST00000516601 115 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 RNU6-678P-201ENST00000516832 109 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 RNU6-1315P-201ENST00000517187 99 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.56□□□□□ -2.16
UPK1AO00322 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.56□□□□□ -2.16
UPK1AO00322 AC012435.1-202ENST00000568772 240 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 DEFB122-202ENST00000569013 197 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.56□□□□□ -2.16
UPK1AO00322 AC011494.1-201ENST00000596454 237 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AC112187.2-201ENST00000604345 283 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AC022893.3-201ENST00000607665 437 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AC092953.2-201ENST00000608000 699 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AC106052.1-201ENST00000608029 497 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AC009974.1-201ENST00000608881 455 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AC021755.4-201ENST00000616620 456 ntBASIC1.56□□□□□ -2.16
UPK1AO00322 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.56□□□□□ -2.16
UPK1AO00322 RNU5E-1-201ENST00000362477 120 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 RNU1-72P-201ENST00000362976 153 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 RNU6-931P-201ENST00000363850 107 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 SMIM11P1-201ENST00000369586 178 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 RNU6-190P-201ENST00000384154 102 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 SNORA26.9-201ENST00000391322 122 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AC127391.1-201ENST00000411737 98 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AC138623.1-201ENST00000418060 216 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.55□□□□□ -2.16
UPK1AO00322 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK1AO00322 AC007677.1-201ENST00000445757 515 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 MTCO1P42-201ENST00000457379 726 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 snoU13.26-201ENST00000459452 105 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 FAM92A1P2-202ENST00000504766 877 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AC020699.1-201ENST00000505161 445 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AC116337.1-201ENST00000509680 687 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.55□□□□□ -2.16
UPK1AO00322 RNU6-914P-201ENST00000516749 109 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UPK1AO00322 EEF1A1P37-201ENST00000522748 715 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 ARL2BPP2-201ENST00000550907 489 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 DUXAP1-201ENST00000556632 463 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AL157871.3-201ENST00000557231 293 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.55□□□□□ -2.16
UPK1AO00322 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 MIR4307-201ENST00000582802 84 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AP001981.2-201ENST00000603241 418 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AP000860.1-201ENST00000605250 559 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AC121334.2-201ENST00000605387 271 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AC130324.3-201ENST00000614165 542 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 AC005296.1-201ENST00000616145 209 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 uc_338.12-201ENST00000616344 181 ntBASIC1.55□□□□□ -2.16
UPK1AO00322 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
UPK1AO00322 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
UPK1AO00322 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UPK1AO00322 ZNF29P-201ENST00000225587 168 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 Y_RNA.18-201ENST00000362461 102 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 Y_RNA.33-201ENST00000362591 102 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 Y_RNA.46-201ENST00000362695 102 ntBASIC1.54□□□□□ -2.16
UPK1AO00322 RNU6-1159P-201ENST00000362933 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms