Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MTND5P42-201ENST00000637720 498 ntBASIC1.69□□□□□ -2.14
DFFAO00273 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.69□□□□□ -2.14
DFFAO00273 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.69□□□□□ -2.14
DFFAO00273 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.68□□□□□ -2.14
DFFAO00273 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
DFFAO00273 AC138393.1-203ENST00000327086 343 ntBASIC1.68□□□□□ -2.14
DFFAO00273 U3.13-201ENST00000364804 214 ntBASIC1.68□□□□□ -2.14
DFFAO00273 SNORA25B-201ENST00000365507 128 ntBASIC1.68□□□□□ -2.14
DFFAO00273 MIR561-201ENST00000385216 97 ntBASIC1.68□□□□□ -2.14
DFFAO00273 RNU6-1242P-201ENST00000391052 103 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AL591034.2-201ENST00000402839 359 ntBASIC1.68□□□□□ -2.14
DFFAO00273 ELOCP17-201ENST00000414751 326 ntBASIC1.68□□□□□ -2.14
DFFAO00273 ELOCP9-201ENST00000418624 239 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AC096920.1-201ENST00000423991 241 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.68□□□□□ -2.14
DFFAO00273 AL591704.1-201ENST00000432574 275 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AL591806.2-201ENST00000433122 173 ntBASIC1.68□□□□□ -2.14
DFFAO00273 PTENP1-201ENST00000447117 1215 ntBASIC1.68□□□□□ -2.14
DFFAO00273 FDX1P2-201ENST00000450769 375 ntBASIC1.68□□□□□ -2.14
DFFAO00273 MTATP6P14-201ENST00000455189 673 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.68□□□□□ -2.14
DFFAO00273 SNORD97-201ENST00000459187 142 ntBASIC1.68□□□□□ -2.14
DFFAO00273 RPS3AP22-201ENST00000488297 769 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AC117522.2-201ENST00000510049 657 ntBASIC1.68□□□□□ -2.14
DFFAO00273 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.68□□□□□ -2.14
DFFAO00273 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.68□□□□□ -2.14
DFFAO00273 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.68□□□□□ -2.14
DFFAO00273 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.68□□□□□ -2.14
DFFAO00273 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.68□□□□□ -2.14
DFFAO00273 AL356432.3-201ENST00000568952 465 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.68□□□□□ -2.14
DFFAO00273 KC877982.1-201ENST00000602313 470 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AL158050.2-201ENST00000605336 568 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AC087045.1-201ENST00000605856 382 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AC107952.2-201ENST00000606048 486 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AP000484.1-201ENST00000620067 1252 ntBASIC1.68□□□□□ -2.14
DFFAO00273 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.68□□□□□ -2.14
DFFAO00273 AC091953.2-201ENST00000623979 160 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.68□□□□□ -2.14
DFFAO00273 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
DFFAO00273 AC006026.1-201ENST00000444025 1803 ntBASIC1.68□□□□□ -2.14
DFFAO00273 AC008555.8-201ENST00000623602 2168 ntBASIC1.68□□□□□ -2.14
DFFAO00273 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
DFFAO00273 ZNF702P-202ENST00000434269 1966 ntBASIC1.67□□□□□ -2.14
DFFAO00273 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
DFFAO00273 RNU6-636P-201ENST00000384598 107 ntBASIC1.67□□□□□ -2.14
DFFAO00273 RNA5SP450-201ENST00000411206 102 ntBASIC1.67□□□□□ -2.14
DFFAO00273 RN7SKP101-201ENST00000411376 320 ntBASIC1.67□□□□□ -2.14
DFFAO00273 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.67□□□□□ -2.14
DFFAO00273 AL358453.1-201ENST00000422522 250 ntBASIC1.67□□□□□ -2.14
DFFAO00273 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.67□□□□□ -2.14
DFFAO00273 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.67□□□□□ -2.14
DFFAO00273 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.67□□□□□ -2.14
DFFAO00273 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.67□□□□□ -2.14
DFFAO00273 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.67□□□□□ -2.14
DFFAO00273 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.67□□□□□ -2.14
DFFAO00273 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.67□□□□□ -2.14
DFFAO00273 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.67□□□□□ -2.14
DFFAO00273 AC018868.1-201ENST00000491307 315 ntBASIC1.67□□□□□ -2.14
DFFAO00273 HMGB1P35-201ENST00000503360 598 ntBASIC1.67□□□□□ -2.14
DFFAO00273 RNU6-1315P-201ENST00000517187 99 ntBASIC1.67□□□□□ -2.14
DFFAO00273 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.67□□□□□ -2.14
DFFAO00273 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.67□□□□□ -2.14
DFFAO00273 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
DFFAO00273 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.67□□□□□ -2.14
DFFAO00273 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.67□□□□□ -2.14
DFFAO00273 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
DFFAO00273 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
DFFAO00273 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.67□□□□□ -2.14
DFFAO00273 AC010928.2-201ENST00000588017 287 ntBASIC1.67□□□□□ -2.14
DFFAO00273 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.67□□□□□ -2.14
DFFAO00273 AC005034.5-201ENST00000604219 466 ntBASIC1.67□□□□□ -2.14
DFFAO00273 AL365204.3-201ENST00000612448 685 ntBASIC1.67□□□□□ -2.14
DFFAO00273 AC005296.1-201ENST00000616145 209 ntBASIC1.67□□□□□ -2.14
DFFAO00273 AC008121.3-201ENST00000618726 433 ntBASIC1.67□□□□□ -2.14
DFFAO00273 AL589994.2-201ENST00000621124 579 ntBASIC1.67□□□□□ -2.14
DFFAO00273 RNA5SP276-201ENST00000362580 94 ntBASIC1.66□□□□□ -2.14
DFFAO00273 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
DFFAO00273 RNA5SP190-201ENST00000365222 118 ntBASIC1.66□□□□□ -2.14
DFFAO00273 SMIM11P1-201ENST00000369586 178 ntBASIC1.66□□□□□ -2.14
DFFAO00273 RNU6-166P-201ENST00000384371 107 ntBASIC1.66□□□□□ -2.14
DFFAO00273 MIR764-201ENST00000390811 85 ntBASIC1.66□□□□□ -2.14
DFFAO00273 FTH1P15-201ENST00000406984 280 ntBASIC1.66□□□□□ -2.14
DFFAO00273 RNU6-757P-201ENST00000410334 100 ntBASIC1.66□□□□□ -2.14
DFFAO00273 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.66□□□□□ -2.14
DFFAO00273 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.66□□□□□ -2.14
DFFAO00273 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.66□□□□□ -2.14
DFFAO00273 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.66□□□□□ -2.14
DFFAO00273 AL591212.2-201ENST00000433923 257 ntBASIC1.66□□□□□ -2.14
DFFAO00273 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.66□□□□□ -2.14
DFFAO00273 snoU109.1-201ENST00000459339 135 ntBASIC1.66□□□□□ -2.14
DFFAO00273 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.66□□□□□ -2.14
DFFAO00273 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.66□□□□□ -2.14
DFFAO00273 AC112206.4-201ENST00000515142 405 ntBASIC1.66□□□□□ -2.14
DFFAO00273 AC034114.1-201ENST00000520293 285 ntBASIC1.66□□□□□ -2.14
DFFAO00273 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.66□□□□□ -2.14
DFFAO00273 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.66□□□□□ -2.14
DFFAO00273 ARL2BPP2-201ENST00000550907 489 ntBASIC1.66□□□□□ -2.14
DFFAO00273 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.66□□□□□ -2.14
DFFAO00273 NDUFA8P1-201ENST00000605525 367 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms