Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC188H7C350 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC188H7C350 AC008716.1-201ENST00000511084 513 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC188H7C350 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC188H7C350 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC188H7C350 AC243972.3-201ENST00000539655 198 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC188H7C350 AC025678.1-201ENST00000567861 338 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC188H7C350 NBR2-204ENST00000587322 63 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 AC008121.1-201ENST00000603244 268 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 AL137847.3-201ENST00000611521 109 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 AC099842.1-201ENST00000619919 596 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 AC006386.2-201ENST00000624491 75 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 AC012005.1-201ENST00000624575 75 ntBASIC2.64□□□□□ -1.99
CCDC188H7C350 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC188H7C350 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC188H7C350 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC188H7C350 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC188H7C350 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC188H7C350 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC188H7C350 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 SNORA75-201ENST00000384158 137 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 RNU6-74P-201ENST00000384235 107 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 RNU6-550P-201ENST00000391057 101 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AL133475.1-201ENST00000404414 305 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC188H7C350 COTL1P1-201ENST00000422309 375 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AC073464.1-201ENST00000429823 534 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC188H7C350 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC188H7C350 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC188H7C350 MTATP6P26-201ENST00000445926 662 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 MTND1P18-201ENST00000448191 573 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC188H7C350 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 UBE2DNL-203ENST00000474922 222 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 RPL36AP48-201ENST00000485521 314 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC188H7C350 AP003072.2-201ENST00000527756 676 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AC234778.2-201ENST00000566241 354 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC188H7C350 PIGPP4-201ENST00000584447 307 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AL670379.10-201ENST00000604330 253 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AL670379.9-201ENST00000605428 253 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AL021997.1-201ENST00000605757 193 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AC087045.1-201ENST00000605856 382 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 AC008945.2-201ENST00000606056 604 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.63□□□□□ -1.99
CCDC188H7C350 AC009161.2-201ENST00000624626 138 ntBASIC2.63□□□□□ -1.99
CCDC188H7C350 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC188H7C350 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
CCDC188H7C350 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC188H7C350 AC138393.1-203ENST00000327086 343 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC188H7C350 RNU6-486P-201ENST00000363116 107 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 RNA5SP456-201ENST00000364002 114 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 SNORD14B-201ENST00000364533 90 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 RNU4-48P-201ENST00000365559 182 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 U3.37-201ENST00000408528 213 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC188H7C350 AC138623.1-201ENST00000418060 216 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC188H7C350 PGBD4P6-201ENST00000421501 610 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC188H7C350 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC188H7C350 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC188H7C350 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC188H7C350 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC188H7C350 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC188H7C350 MTAPP1-201ENST00000489154 819 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC188H7C350 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC188H7C350 RNU6-1178P-201ENST00000516674 107 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 SNORA31.15-201ENST00000516771 132 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 RNU6-685P-201ENST00000517088 95 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 SCARNA3-201ENST00000517097 143 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 AP004607.1-201ENST00000524456 203 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC188H7C350 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC188H7C350 AC079600.2-201ENST00000550076 130 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC188H7C350 LARP7P3-201ENST00000579888 337 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 AC011155.2-201ENST00000623202 216 ntBASIC2.62□□□□□ -1.99
CCDC188H7C350 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC188H7C350 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC188H7C350 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC188H7C350 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC188H7C350 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC188H7C350 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC188H7C350 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC188H7C350 SNORA38-201ENST00000363946 132 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 FTH1P15-201ENST00000406984 280 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 RNU4-46P-201ENST00000410818 138 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 RNU6-1328P-201ENST00000410938 106 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 EEF1A1P40-201ENST00000412883 573 ntBASIC2.61□□□□□ -1.99
CCDC188H7C350 CDK8P2-201ENST00000415020 547 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms