Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL158209.2-201ENST00000619266 216 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AL359740.1-201ENST00000624340 592 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 MIR6863-201ENST00000636112 90 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 SDAD1P2-201ENST00000441308 2028 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 UBE2L2-201ENST00000254302 429 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 SNORD3E-201ENST00000362899 217 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-1284P-201ENST00000363701 100 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-61P-201ENST00000365528 109 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-1215P-201ENST00000384441 102 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AL513475.1-201ENST00000406602 315 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 Y_RNA.599-201ENST00000410489 109 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AL513331.1-201ENST00000411908 397 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 HMGB3P2-201ENST00000411913 584 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RAC1P6-201ENST00000423911 575 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AL512844.2-201ENST00000433990 593 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC013267.1-201ENST00000458227 267 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RPS20P20-201ENST00000460498 340 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RPS27P26-201ENST00000494583 239 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC092436.1-201ENST00000506450 503 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC108078.2-201ENST00000510750 236 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AL359273.1-201ENST00000510918 627 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-123P-201ENST00000516163 102 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RNU1-104P-201ENST00000517280 175 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC098848.2-201ENST00000588023 330 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC068790.6-201ENST00000602558 258 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC245014.2-201ENST00000603689 287 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC246785.4-201ENST00000605374 287 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 MTND1P37-201ENST00000636562 264 ntBASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM49D1C9J1S8 TPTE2P4-201ENST00000258589 1605 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 HSPA8P4-201ENST00000511877 1920 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 RNU1-105P-201ENST00000363470 161 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 Y_RNA.296-201ENST00000364930 108 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 RNA5SP138-201ENST00000365098 114 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 XGY1-201ENST00000381172 446 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 GSTA9P-201ENST00000406231 611 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 Z82209.1-201ENST00000422141 2135 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 MTCYBP8-201ENST00000422855 651 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 USP12PX-201ENST00000432383 1057 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 MTND1P4-201ENST00000435196 415 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 MTND1P34-201ENST00000438556 671 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 FDX1P2-201ENST00000450769 375 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-420P-201ENST00000458780 107 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 MRPS17P3-201ENST00000465453 385 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC006512.1-201ENST00000468816 291 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 RNU7-51P-201ENST00000516560 62 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 Y_RNA.689-201ENST00000516589 107 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 ATP5F1P5-201ENST00000526403 760 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AL359212.1-201ENST00000556608 614 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 OR1M4P-201ENST00000589199 287 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC136601.2-201ENST00000604356 474 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 MTND4LP5-201ENST00000605152 292 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC007684.1-201ENST00000609671 477 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC103710.1-201ENST00000610003 901 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC099654.12-201ENST00000639868 649 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 ZNF680P1-201ENST00000436625 1469 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 AC007785.2-201ENST00000598627 1916 ntBASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM49D1C9J1S8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 MTND4P5-201ENST00000435821 1374 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 AC008568.2-201ENST00000623862 2313 ntBASIC2.12□□□□□ -2.07
TRIM49D1C9J1S8 HSPE1P11-201ENST00000339579 310 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms