Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC85CA6NKD9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC85CA6NKD9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC85CA6NKD9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CCDC85CA6NKD9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC85CA6NKD9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CCDC85CA6NKD9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AL672167.1-203ENST00000641299 2975 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 MIR422A-201ENST00000362286 90 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 Y_RNA.395-201ENST00000383945 109 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 RNU1-44P-201ENST00000384453 163 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 U3.37-201ENST00000408528 213 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AL030996.1-201ENST00000411430 235 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 RPL36AP10-201ENST00000421785 322 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 DAP3P1-201ENST00000441522 278 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 Y_RNA.653-201ENST00000459091 95 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 RPL30P14-201ENST00000482744 348 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 MTCYBP40-201ENST00000509390 1135 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 CBX3P7-201ENST00000532876 502 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 TRAV32-201ENST00000553993 340 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AL391261.3-201ENST00000557194 520 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 ANP32BP3-201ENST00000559213 706 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AC073657.2-201ENST00000605661 303 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AC090971.5-201ENST00000621102 293 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 AC134503.1-201ENST00000633048 54 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 CDC27P3-201ENST00000635418 1910 ntBASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC85CA6NKD9 RNU6-658P-201ENST00000384606 106 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AC016831.2-201ENST00000417179 352 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AC003685.2-201ENST00000422795 395 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AP002884.2-201ENST00000471647 395 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AC113155.1-201ENST00000511141 769 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 Y_RNA.687-201ENST00000516558 91 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 MIR4425-201ENST00000580572 84 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AL133215.3-201ENST00000609801 448 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AL157817.1-201ENST00000614264 790 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AC133104.2-201ENST00000615272 193 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AC138627.2-201ENST00000624202 601 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 U4.7-201ENST00000638126 106 ntBASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CCDC85CA6NKD9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 AC011266.1-201ENST00000624119 3569 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 RNA5SP295-201ENST00000362655 121 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 Y_RNA.138-201ENST00000363462 102 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 RNU6-596P-201ENST00000365395 98 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 RNU6-310P-201ENST00000384655 107 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 SNORA75.4-201ENST00000391278 119 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 RNU6-1050P-201ENST00000410388 107 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 RPL23AP82-202ENST00000427528 469 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 AC107083.1-201ENST00000439643 279 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 RPS26P2-201ENST00000440331 348 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 RNU6-1037P-201ENST00000459571 107 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 NACAP3-201ENST00000552100 481 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 MIR5004-201ENST00000579078 107 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 AC011494.1-201ENST00000596454 237 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 AC008962.1-201ENST00000605729 304 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 AC015871.5-202ENST00000623252 701 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 MTND5P10-201ENST00000603719 1809 ntBASIC4.16□□□□□ -1.74
CCDC85CA6NKD9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC85CA6NKD9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC85CA6NKD9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC85CA6NKD9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CCDC85CA6NKD9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 RNU6-1106P-201ENST00000390845 107 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 Y_RNA.594-201ENST00000410373 140 ntBASIC4.15□□□□□ -1.75
CCDC85CA6NKD9 BPY2DP-201ENST00000422208 265 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms