Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.63□□□□□ -2.31
TCRBV3S1A0A5B6 RNU6-492P-201ENST00000363035 104 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 RNU1-22P-201ENST00000363334 158 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 RNU1-124P-201ENST00000363861 145 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 MIR506-201ENST00000384998 124 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC069282.1-201ENST00000411911 526 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AL139421.1-201ENST00000423010 169 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AL591806.2-201ENST00000433122 173 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 DUXAP8-207ENST00000456786 622 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 RPL23AP94-201ENST00000512518 302 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 SNORD116-28-201ENST00000516123 91 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 RNU6-927P-201ENST00000516199 100 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 RNU6-586P-201ENST00000517265 104 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 SUB1P4-201ENST00000566062 339 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC233266.2-201ENST00000567067 528 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 RPL30P11-203ENST00000598995 310 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 WISP1-OT1-201ENST00000602893 642 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 BBIP1P1-201ENST00000602999 279 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 AC092125.1-201ENST00000562568 1995 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 HAUS6P2-201ENST00000433254 2404 ntBASIC0.62□□□□□ -2.31
TCRBV3S1A0A5B6 RNU6-1080P-201ENST00000383982 107 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 MIR764-201ENST00000390811 85 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 TMSB4XP8-201ENST00000402089 135 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 MIR1302-8-201ENST00000408342 128 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 TMSB4XP6-201ENST00000415187 135 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 BTF3L4P3-201ENST00000418879 476 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC013410.2-201ENST00000422627 201 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 TMSB4XP1-201ENST00000424567 135 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AL121578.1-201ENST00000428051 892 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 OR6C5P-201ENST00000452388 923 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 OFD1P3Y-201ENST00000453312 783 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 FABP5P15-201ENST00000453566 214 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AL441985.1-201ENST00000457727 251 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC091860.1-201ENST00000505723 432 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC079140.2-201ENST00000506193 142 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC116655.1-201ENST00000508324 901 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AP003392.2-201ENST00000527269 208 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AP000763.2-201ENST00000540641 163 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 MRPS36P5-201ENST00000551909 298 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 LINC00557-201ENST00000563184 1279 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AL161798.1-201ENST00000604630 131 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC211469.2-201ENST00000605461 205 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC087045.1-201ENST00000605856 382 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AL390208.1-201ENST00000605885 644 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC034229.4-201ENST00000607861 441 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 AC084824.4-201ENST00000620106 731 ntBASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.61□□□□□ -2.31
TCRBV3S1A0A5B6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 RNU6-1167P-201ENST00000363227 94 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 SNORA29-201ENST00000384183 140 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 DHFRP6-201ENST00000401776 268 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 RNU2-32P-201ENST00000411193 191 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC006461.1-201ENST00000412637 326 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 POLR2J4-204ENST00000418424 324 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 PIGFP2-201ENST00000421400 651 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC004941.2-201ENST00000427009 228 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC234064.1-201ENST00000436312 247 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 RPL39P6-201ENST00000448289 150 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 RNU7-140P-201ENST00000459546 60 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC114982.1-201ENST00000469402 321 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC108729.1-201ENST00000487812 947 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 TMEM251P1-201ENST00000503717 318 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC108078.1-201ENST00000508073 725 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 ACA64.5-201ENST00000516207 127 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 RNU5B-3P-201ENST00000516601 115 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC104229.1-201ENST00000561364 255 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC090615.1-201ENST00000577519 154 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC108706.1-201ENST00000611053 297 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 AC132825.7-201ENST00000638744 335 ntBASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TCRBV3S1A0A5B6 SUGT1P1-201ENST00000379514 476 ntBASIC0.59□□□□□ -2.31
TCRBV3S1A0A5B6 SRIP3-201ENST00000413200 219 ntBASIC0.59□□□□□ -2.31
TCRBV3S1A0A5B6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.59□□□□□ -2.31
TCRBV3S1A0A5B6 NCOR1P3-201ENST00000420479 303 ntBASIC0.59□□□□□ -2.31
TCRBV3S1A0A5B6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.59□□□□□ -2.31
TCRBV3S1A0A5B6 MTCYBP11-201ENST00000447254 1109 ntBASIC0.59□□□□□ -2.31
TCRBV3S1A0A5B6 AC087477.1-201ENST00000465747 340 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms