Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHAC2Q9Y5I4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PCDHAC2Q9Y5I4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AL139276.1-201ENST00000311910 1001 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 CBX3P1-201ENST00000325243 554 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 Y_RNA.255-201ENST00000364581 97 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 MIR454-201ENST00000390180 115 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AL359634.1-202ENST00000404721 284 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC114491.1-201ENST00000416095 246 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 RAC1P6-201ENST00000423911 575 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 CALM1P1-201ENST00000442082 433 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AL513124.1-201ENST00000450410 614 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AL118520.1-201ENST00000450770 291 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 PMCHL2-203ENST00000457791 237 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 RPS29P15-201ENST00000458329 171 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU7-63P-201ENST00000459054 62 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 GMFBP1-201ENST00000467831 427 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 RPL7P5-201ENST00000471472 736 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 RN7SL283P-201ENST00000489055 303 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC114786.4-201ENST00000508771 728 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC025465.4-201ENST00000513422 638 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 RNU1-61P-201ENST00000516107 151 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 RNA5SP24-201ENST00000516478 95 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 CENPUP1-201ENST00000526649 1202 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 RPL23AP84-201ENST00000571193 464 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC005951.2-201ENST00000576282 495 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 FGF7P1-201ENST00000582820 288 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC010525.2-201ENST00000590920 195 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC106900.2-201ENST00000604994 317 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC021646.1-201ENST00000605469 484 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AL121757.2-201ENST00000611223 313 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC009033.1-201ENST00000624279 431 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 AC006026.1-201ENST00000444025 1803 ntBASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHAC2Q9Y5I4 OR4G2P-202ENST00000641004 1759 ntBASIC3.15□□□□□ -1.9
PCDHAC2Q9Y5I4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.15□□□□□ -1.9
PCDHAC2Q9Y5I4 AC092435.3-201ENST00000565538 3654 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC073343.1-201ENST00000328239 651 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 SNORA62.1-201ENST00000364287 154 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 RNU6-996P-201ENST00000365438 107 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 SMIM11P1-201ENST00000369586 178 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 SNORA36C-201ENST00000384289 132 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 MIR518C-201ENST00000384822 101 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 NDUFS5P1-201ENST00000405668 289 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 RNU2-39P-201ENST00000410604 198 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 EEF1A1P40-201ENST00000412883 573 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 PDCL2P1-201ENST00000419302 352 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 SRIP2-201ENST00000428470 166 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 DDX3P2-201ENST00000446138 111 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 SSXP4-201ENST00000451349 245 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC091179.1-201ENST00000461606 579 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC006512.1-201ENST00000468816 291 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AL163973.1-201ENST00000484753 577 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 EIF4EP3-201ENST00000498782 656 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 RNU6-1092P-201ENST00000516955 87 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 UBE2V2P2-201ENST00000587677 504 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AC005034.5-201ENST00000604219 466 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 AL390240.1-201ENST00000612950 384 ntBASIC3.15□□□□□ -1.91
PCDHAC2Q9Y5I4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 RNU6-61P-201ENST00000365528 109 ntBASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 SNORA24.1-201ENST00000384401 135 ntBASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 MIR514A2-201ENST00000385131 88 ntBASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 MIR514A3-201ENST00000385132 88 ntBASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 RN7SKP140-201ENST00000411196 284 ntBASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 RPL7P46-201ENST00000425129 740 ntBASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHAC2Q9Y5I4 AL162395.1-201ENST00000457882 422 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms