Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 RNU1-73P-201ENST00000383971 164 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 Y_RNA.482-201ENST00000384377 111 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 MIR10A-201ENST00000385043 110 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 MIR34A-201ENST00000385130 110 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC126124.2-201ENST00000413542 321 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 Z99755.1-201ENST00000414048 380 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 RPS15AP6-201ENST00000420703 385 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 HMGN2P30-201ENST00000423237 256 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 CYCSP4-201ENST00000429682 331 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 NOTCH2P1-201ENST00000443481 624 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC130509.1-201ENST00000464158 433 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC096745.1-201ENST00000509945 370 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC092436.3-201ENST00000511788 257 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-928P-201ENST00000516876 104 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 MIR4782-201ENST00000577987 79 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC044792.1-201ENST00000593294 196 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AL138880.2-201ENST00000616214 239 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 U6.99-201ENST00000637524 83 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AF117829.1-206ENST00000621883 3802 ntBASIC3.58□□□□□ -1.84
PCDHA3Q9Y5H8 AC091152.2-201ENST00000591628 2569 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 SRP72P2-201ENST00000344851 1979 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-884P-201ENST00000363889 107 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-593P-201ENST00000364716 112 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-1297P-201ENST00000384415 104 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 MIR23B-201ENST00000384832 97 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 RN7SKP111-201ENST00000410349 271 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 RNU4-14P-201ENST00000410858 122 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 NDUFS5P4-201ENST00000412983 318 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 RPL23AP22-201ENST00000437556 453 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 HMGN1P18-201ENST00000457642 277 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 SNORD19B-201ENST00000459623 84 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-559P-201ENST00000516151 98 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-1183P-201ENST00000517054 60 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 CYCSP39-201ENST00000565821 309 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 FRG2DP-202ENST00000566967 323 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 AL356274.2-201ENST00000624379 3752 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PCDHA3Q9Y5H8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 RNU6-95P-201ENST00000384697 107 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 PTMAP2-201ENST00000397627 327 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AL356057.2-201ENST00000403318 432 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AC099548.1-201ENST00000421443 426 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 PGBD4P6-201ENST00000421501 610 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AL353729.1-201ENST00000425044 720 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 TOMM20P4-201ENST00000427861 435 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 LINC00933-203ENST00000559812 219 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 H3F3AP1-201ENST00000559984 334 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 MIR7851-201ENST00000610611 160 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AC006133.1-201ENST00000617106 264 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AC010378.1-201ENST00000619270 362 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 AL160413.1-201ENST00000622780 310 ntBASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHA3Q9Y5H8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHA3Q9Y5H8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms