Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 BNIP3P25-201ENST00000596023 559 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC091965.4-201ENST00000607691 587 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC097478.2-201ENST00000610572 514 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.71□□□□□ -2.13
RHBDD3Q9Y3P4 Y_RNA.33-201ENST00000362591 102 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 RNU4-68P-201ENST00000364314 141 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC138623.1-201ENST00000418060 216 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC006366.1-201ENST00000422002 759 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AL022400.1-201ENST00000423946 935 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AL035407.1-201ENST00000429211 571 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AL445646.1-201ENST00000431784 216 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 USP9YP24-201ENST00000434374 697 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 HMGB3P12-201ENST00000438745 556 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC104058.1-201ENST00000448028 297 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 RPL23AP35-201ENST00000451906 501 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC006512.1-201ENST00000468816 291 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 MED28P2-201ENST00000475771 317 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 FAM92A1P2-202ENST00000504766 877 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 ANXA2P1-201ENST00000505539 926 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 RNU6-914P-201ENST00000516749 109 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 ANP32BP3-201ENST00000559213 706 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC023813.2-201ENST00000564321 469 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AL356432.3-201ENST00000568952 465 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 SNRPGP19-201ENST00000603826 189 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC099842.1-201ENST00000619919 596 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 AC004808.1-201ENST00000627671 721 ntBASIC1.71□□□□□ -2.14
RHBDD3Q9Y3P4 RNU6-611P-201ENST00000384276 104 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 RNU6-843P-201ENST00000384454 104 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 RNU4-22P-201ENST00000411058 166 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC009518.2-201ENST00000418056 731 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 RPL31P63-201ENST00000422565 375 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC087884.1-201ENST00000469738 328 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 MTAPP1-201ENST00000489154 819 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC010486.1-201ENST00000511793 424 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 RNU2-53P-201ENST00000516257 147 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 RNU6-667P-201ENST00000517186 102 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 OR11H5P-201ENST00000554039 926 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 MIR4713-201ENST00000582691 75 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 MTND3P19-201ENST00000603825 345 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC112187.2-201ENST00000604345 283 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AC022893.3-201ENST00000607665 437 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 uc_338.12-201ENST00000616344 181 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AL359314.1-201ENST00000616913 261 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 U1.36-201ENST00000620684 176 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AL589994.2-201ENST00000621124 579 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AL356596.1-201ENST00000624230 379 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 AL138960.2-201ENST00000625145 535 ntBASIC1.7□□□□□ -2.14
RHBDD3Q9Y3P4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 RSL24D1P4-201ENST00000400938 484 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 RN7SKP284-201ENST00000411002 343 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 AC008267.5-201ENST00000424928 265 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 MTND3P1-201ENST00000441336 220 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 SNORA59A-201ENST00000459326 152 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 AP000763.2-201ENST00000540641 163 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 HSBP1P1-201ENST00000555205 166 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 AC091544.4-201ENST00000555268 342 ntBASIC1.69□□□□□ -2.14
RHBDD3Q9Y3P4 AL049838.1-201ENST00000563647 981 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms