Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL356057.2-201ENST00000403318 432 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AL139397.2-201ENST00000404529 772 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AL139396.1-201ENST00000421137 167 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AL590383.1-201ENST00000428602 75 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RPL23AP69-201ENST00000431134 458 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 BX679664.1-201ENST00000434429 253 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RPL23AP22-201ENST00000437556 453 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RPL21P41-201ENST00000459863 264 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RPS20P22-201ENST00000473700 357 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RPL31P60-201ENST00000478450 367 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RPL39P5-202ENST00000512505 151 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 SNORA14.1-201ENST00000516113 141 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.682-201ENST00000516457 100 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-566P-201ENST00000516790 107 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 CYCSP27-201ENST00000527643 293 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 HPRT1P3-201ENST00000539521 576 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AC004024.1-201ENST00000549244 247 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 ATP1B3P1-201ENST00000605365 821 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AC107294.3-201ENST00000609211 526 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 SCARNA15.3-201ENST00000626315 122 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 SCARNA4.1-201ENST00000628597 123 ntBASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSX2IPQ9Y2D8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-1252P-201ENST00000363054 104 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-1167P-201ENST00000363227 94 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-371P-201ENST00000364283 108 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 MIR301A-201ENST00000385261 86 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 MIR450B-201ENST00000401182 78 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC074085.1-201ENST00000413598 418 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 BTF3L4P3-201ENST00000418879 476 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC107399.1-201ENST00000451226 265 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.635-201ENST00000459041 101 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 Y_RNA.632-201ENST00000459189 102 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC091179.1-201ENST00000461606 579 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 RPL23AP67-201ENST00000465341 474 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 RPL27AP5-201ENST00000469428 449 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 RN7SL442P-201ENST00000473804 320 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-1088P-201ENST00000516850 104 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 RNU6-273P-201ENST00000516937 96 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 MIR3672-201ENST00000584290 82 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC023043.2-201ENST00000589678 1026 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 AC016727.1-205ENST00000605437 569 ntBASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SSX2IPQ9Y2D8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
SSX2IPQ9Y2D8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.59□□□□□ -1.84
SSX2IPQ9Y2D8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 Y_RNA.339-201ENST00000365325 102 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 Y_RNA.480-201ENST00000384364 102 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 MIR548K-201ENST00000408406 116 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 VN1R36P-201ENST00000414936 291 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AL357552.1-201ENST00000445254 415 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC007677.1-201ENST00000445757 515 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC125238.1-201ENST00000448842 249 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 RPS4XP2-201ENST00000458402 793 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC084357.1-201ENST00000473404 255 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC109925.1-201ENST00000478069 331 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-1069P-201ENST00000516612 133 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 SNORA70.19-201ENST00000516717 90 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 SNORA25.17-201ENST00000517184 124 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 RNA5SP380-201ENST00000517190 98 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 RNA5SP454-201ENST00000517231 127 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms