Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC034229.5-201ENST00000624258 185 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 AC008785.1-201ENST00000624475 456 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NOD1Q9Y239 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NOD1Q9Y239 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NOD1Q9Y239 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NOD1Q9Y239 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NOD1Q9Y239 RNU6-942P-201ENST00000363002 107 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 RNU6-187P-201ENST00000384139 106 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 RNU1-13P-201ENST00000384499 162 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 MIR518D-201ENST00000385014 87 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 RNU6-1197P-201ENST00000391183 107 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 SNORD12B-201ENST00000410433 91 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 AC091874.1-201ENST00000511402 339 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 RNU6-1114P-201ENST00000516022 107 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 Vault.1-201ENST00000516474 102 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 RNU6-255P-201ENST00000516957 105 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 AL359219.2-201ENST00000555184 348 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 ZNF192P1-203ENST00000565888 810 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 MIR3910-1-201ENST00000580936 111 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 FTX_3.1-201ENST00000610451 147 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NOD1Q9Y239 AL353743.1-202ENST00000431724 1695 ntBASIC4.92□□□□□ -1.62
NOD1Q9Y239 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.92□□□□□ -1.62
NOD1Q9Y239 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NOD1Q9Y239 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NOD1Q9Y239 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 RNA5SP361-201ENST00000362686 118 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 UBBP2-201ENST00000376781 231 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 Y_RNA.504-201ENST00000384481 104 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 RNU6-541P-201ENST00000384709 110 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 MIR493-201ENST00000385254 89 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 AL512844.2-201ENST00000433990 593 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 MTATP6P7-201ENST00000453315 681 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 RPL23AP14-201ENST00000468281 468 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 BTF3L4P4-201ENST00000506381 449 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 RNA5SP230-201ENST00000517039 122 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC090281.1-201ENST00000523019 276 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC087441.2-201ENST00000529141 262 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC093591.2-201ENST00000565254 3843 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC010620.2-201ENST00000600135 313 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC024581.2-201ENST00000619986 252 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 RNA5SP196-201ENST00000625967 102 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 MIR492-201ENST00000638676 116 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 AC139713.2-215ENST00000641428 5037 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NOD1Q9Y239 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
NOD1Q9Y239 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.91□□□□□ -1.62
NOD1Q9Y239 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NOD1Q9Y239 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.9□□□□□ -1.62
NOD1Q9Y239 ZNF826P-207ENST00000622273 1910 ntBASIC4.9□□□□□ -1.62
NOD1Q9Y239 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.9□□□□□ -1.62
NOD1Q9Y239 Y_RNA.286-201ENST00000364813 102 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 RNU6-326P-201ENST00000365480 107 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 SNORA29-201ENST00000384183 140 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 MIR3065-201ENST00000390137 79 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 RNA5SP213-201ENST00000391031 106 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 RNU4-30P-201ENST00000410245 143 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.9□□□□□ -1.63
NOD1Q9Y239 AC098831.1-201ENST00000440661 216 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.9□□□□□ -1.63
NOD1Q9Y239 SSXP4-201ENST00000451349 245 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 RNU2-31P-201ENST00000516954 155 ntBASIC4.9□□□□□ -1.63
NOD1Q9Y239 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NOD1Q9Y239 AC034105.4-201ENST00000568304 277 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms