Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC107294.3-201ENST00000609211 526 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 AL355073.2-201ENST00000612106 557 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 AC006504.8-201ENST00000621046 635 ntBASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CDK11AQ9UQ88 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 FTLP6-201ENST00000355274 422 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 SNORA72.1-201ENST00000363485 129 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 Y_RNA.160-201ENST00000363677 92 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 RNU4-66P-201ENST00000365199 138 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 RNU6-116P-201ENST00000384042 109 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 RNU6-217P-201ENST00000384164 104 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 RNA5SP184-201ENST00000411071 108 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 AL513185.2-201ENST00000425543 193 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 ZNF863P-201ENST00000426746 417 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 RPL36AP53-201ENST00000432891 316 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 MTND3P16-201ENST00000452205 344 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 RAC1P5-201ENST00000512182 576 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 SNORA20.3-201ENST00000516880 132 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 RNU6-143P-201ENST00000516942 93 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 MTND4P7-201ENST00000523876 130 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 AL137161.1-201ENST00000532231 390 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 BNIP3P9-201ENST00000603714 553 ntBASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK11AQ9UQ88 SRP72P2-201ENST00000344851 1979 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AC009161.1-201ENST00000417306 376 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 BTF3L4P3-201ENST00000418879 476 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AC099548.1-201ENST00000421443 426 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AL591704.1-201ENST00000432574 275 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AL121601.2-201ENST00000438019 707 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 MTND5P20-201ENST00000448677 143 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 RNU7-23P-201ENST00000459465 62 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 RPS15AP34-201ENST00000487776 387 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AL160314.1-201ENST00000490836 438 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 RN7SKP132-201ENST00000516001 208 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 RN7SKP282-201ENST00000516824 299 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 CENPUP1-201ENST00000526649 1202 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 MIR4319-201ENST00000577285 85 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 ATP1B3P1-201ENST00000605365 821 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 uc_338.34-201ENST00000617467 174 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AC110079.1-202ENST00000635213 138 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 MTND1P37-201ENST00000636562 264 ntBASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDK11AQ9UQ88 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
CDK11AQ9UQ88 FAM35CP-201ENST00000554755 2470 ntBASIC4.65□□□□□ -1.66
CDK11AQ9UQ88 UBE2L2-201ENST00000254302 429 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 Y_RNA.231-201ENST00000364358 102 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 Y_RNA.303-201ENST00000364998 94 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 RNU6-805P-201ENST00000365643 106 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 AC092809.3-201ENST00000415453 231 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 RPL21P111-201ENST00000418453 477 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 SRIP2-201ENST00000428470 166 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 SAR1AP4-201ENST00000429225 591 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 ERLEC1P1-201ENST00000433806 578 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 AC104058.1-201ENST00000448028 297 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 RNU7-180P-201ENST00000459240 63 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 RPS27P29-201ENST00000463110 252 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 SCGB1D5P-201ENST00000515134 247 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 AC093010.3-201ENST00000570269 15214 ntBASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDK11AQ9UQ88 AC062016.1-201ENST00000355719 319 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 Y_RNA.72-201ENST00000362894 103 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 Y_RNA.86-201ENST00000363020 111 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 RNU6-1167P-201ENST00000363227 94 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 RNU1-105P-201ENST00000363470 161 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 CISD1P1-201ENST00000393907 327 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 RNA5SP31-201ENST00000411144 127 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 NUP35P1-201ENST00000422734 947 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 RPL23AP58-201ENST00000440453 469 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 RPS12P18-201ENST00000442381 270 ntBASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK11AQ9UQ88 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms