Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.13□□□□□ -2.07
CHRNA9Q9UGM1 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.13□□□□□ -2.07
CHRNA9Q9UGM1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.13□□□□□ -2.07
CHRNA9Q9UGM1 AP006437.1-201ENST00000641440 3685 ntBASIC2.13□□□□□ -2.07
CHRNA9Q9UGM1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 RNU5E-1-201ENST00000362477 120 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 MIR558-201ENST00000384920 94 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC009963.1-201ENST00000417265 157 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC013410.2-201ENST00000422627 201 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AL160275.3-201ENST00000423876 471 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 MTND5P2-201ENST00000442927 1142 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC012308.1-201ENST00000451232 178 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 MED28P2-201ENST00000475771 317 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC068587.2-201ENST00000478386 781 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC117522.1-201ENST00000509821 380 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AP001372.4-201ENST00000524889 472 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 MIR3126-201ENST00000577443 74 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC018638.7-201ENST00000605836 1114 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AL356266.1-201ENST00000623311 483 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 AC008555.8-201ENST00000623602 2168 ntBASIC2.12□□□□□ -2.07
CHRNA9Q9UGM1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 RNU1-72P-201ENST00000362976 153 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 RNY1P12-201ENST00000364251 105 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 RNU5E-5P-201ENST00000365379 116 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 FTH1P15-201ENST00000406984 280 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 AC011005.2-201ENST00000487324 359 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 CBX3P7-201ENST00000532876 502 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 MIR4529-201ENST00000578110 78 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 AC112191.3-201ENST00000604371 277 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 AL451064.1-201ENST00000607718 471 ntBASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CHRNA9Q9UGM1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 RNU1-57P-201ENST00000384491 166 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 RPL23AP32-201ENST00000395315 459 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 RNA5SP390-201ENST00000410191 113 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 RNU2-39P-201ENST00000410604 198 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 CALM2P2-201ENST00000428512 440 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 USP9YP12-201ENST00000450481 570 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 KATNBL1P6-201ENST00000453433 915 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 HMGB1P30-201ENST00000492455 606 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC107222.1-201ENST00000510899 637 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 Y_RNA.672-201ENST00000516289 104 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 RNU7-193P-201ENST00000516723 65 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 SNORA31.25-201ENST00000517242 134 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 OR5B19P-201ENST00000531766 928 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC090616.2-202ENST00000584248 222 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 MIR548AC-201ENST00000585049 88 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC105129.3-201ENST00000605455 485 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC012409.4-201ENST00000612923 249 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AP001486.3-201ENST00000615334 372 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC108479.2-201ENST00000617314 601 ntBASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.1□□□□□ -2.07
CHRNA9Q9UGM1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms