Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 ZNF680P1-201ENST00000436625 1469 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 SNORA38-201ENST00000363946 132 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 RNU6-384P-201ENST00000364900 104 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 RNU6-748P-201ENST00000384648 107 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 MIR10A-201ENST00000385043 110 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 RPL21P90-201ENST00000415692 466 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC073464.1-201ENST00000429823 534 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AL671855.1-201ENST00000446875 1203 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AP001324.2-201ENST00000461163 319 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC003982.1-202ENST00000469928 248 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 RPL7P49-201ENST00000471402 708 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC108078.1-201ENST00000508073 725 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC105313.1-201ENST00000509121 353 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 RNU6-405P-201ENST00000516637 110 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 RNA5SP402-201ENST00000517148 110 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC009063.1-201ENST00000563342 702 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC106782.4-201ENST00000568264 210 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 MIR4703-201ENST00000577728 79 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 MIR4444-1-201ENST00000581696 74 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 MIR4444-2-201ENST00000584390 74 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC073539.2-201ENST00000597113 165 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AL391646.1-201ENST00000603860 190 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC005046.1-201ENST00000608515 625 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 U6.42-201ENST00000618440 107 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 AC000403.1-201ENST00000613696 3585 ntBASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.8□□□□□ -1.96
CPSF2Q9P2I0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 RNU6-1103P-201ENST00000384150 107 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 MIR34B-201ENST00000385076 84 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 CIR1P3-201ENST00000405137 479 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 GSTA9P-201ENST00000406231 611 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AL663109.1-201ENST00000411498 844 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 Z82209.1-201ENST00000422141 2135 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AL451074.3-201ENST00000437709 472 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AL122001.1-201ENST00000457027 370 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AC006512.1-201ENST00000468816 291 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AC079382.1-201ENST00000493346 557 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 HMGB1P29-201ENST00000505659 499 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 SLC25A15P5-201ENST00000508033 253 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 RNU1-86P-201ENST00000516108 154 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 RNU1-107P-201ENST00000516617 154 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 HPRT1P3-201ENST00000539521 576 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AC012493.2-201ENST00000595083 291 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 AC069200.1-201ENST00000609511 323 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 uc_338.14-201ENST00000613162 166 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CPSF2Q9P2I0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 RNU6-1120P-201ENST00000362988 108 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 Y_RNA.296-201ENST00000364930 108 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 AC068050.1-201ENST00000394891 380 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 FTH1P15-201ENST00000406984 280 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 RNU4-46P-201ENST00000410818 138 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 MTCO2P19-201ENST00000427513 598 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 USP9YP14-201ENST00000430663 563 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 AL118520.1-201ENST00000450770 291 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 AC092436.1-201ENST00000506450 503 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 AC010493.1-201ENST00000513479 292 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 MIR5692A1-201ENST00000580523 69 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 MIR3605-201ENST00000583214 100 ntBASIC2.78□□□□□ -1.96
CPSF2Q9P2I0 SRGNP1-201ENST00000603392 451 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms