Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD7Q9P2D1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.08□□□□□ -2.4
CHD7Q9P2D1 RN7SKP287-201ENST00000516546 266 ntBASIC0.08□□□□□ -2.4
CHD7Q9P2D1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.08□□□□□ -2.4
CHD7Q9P2D1 AC009509.4-201ENST00000619202 509 ntBASIC0.08□□□□□ -2.4
CHD7Q9P2D1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 RNY3P5-201ENST00000384127 102 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC093106.2-201ENST00000428212 385 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 RPS15AP27-201ENST00000449183 343 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC011406.1-201ENST00000512440 370 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC025465.4-201ENST00000513422 638 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AP003049.1-201ENST00000529418 457 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 RNU6-514P-201ENST00000384208 107 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 Y_RNA.468-201ENST00000384298 102 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 NDUFB4P10-201ENST00000452541 359 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 MRPS36P2-201ENST00000512569 299 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC112206.3-201ENST00000514578 389 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 RNU6-1004P-201ENST00000516584 111 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC106900.2-201ENST00000604994 317 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 AC099654.5-201ENST00000636479 350 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.07□□□□□ -2.4
CHD7Q9P2D1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
CHD7Q9P2D1 Y_RNA.447-201ENST00000384184 113 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 Y_RNA.495-201ENST00000384435 112 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 MIR224-201ENST00000384889 81 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
CHD7Q9P2D1 RNA5SP118-201ENST00000410385 109 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 RNU4-78P-201ENST00000410940 126 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 RNA5SP57-201ENST00000459463 123 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 RPS26P45-201ENST00000471748 340 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.06□□□□□ -2.4
CHD7Q9P2D1 SNORD3E-201ENST00000362899 217 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 RNU1-119P-201ENST00000391122 165 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AC069282.1-201ENST00000411911 526 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 RPL7L1P10-201ENST00000427790 463 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.06□□□□□ -2.4
CHD7Q9P2D1 MIR892C-201ENST00000516410 77 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AP003122.4-201ENST00000530980 758 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AC025588.2-201ENST00000604851 466 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AC009310.1-201ENST00000414414 451 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AC092047.1-201ENST00000424997 240 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 PAXBP1P1-201ENST00000449315 447 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 AC093677.1-201ENST00000514414 678 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 SNORA48.10-201ENST00000516965 160 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.06□□□□□ -2.4
CHD7Q9P2D1 MIR378F-201ENST00000578143 78 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 MIR8065-201ENST00000620577 100 ntBASIC0.06□□□□□ -2.4
CHD7Q9P2D1 RNU4-7P-201ENST00000364758 141 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AC016717.1-201ENST00000448918 286 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 RAP1BP2-201ENST00000478270 544 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 HMGB1P36-201ENST00000487709 576 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AC002350.1-201ENST00000490759 375 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AC074198.2-201ENST00000508153 258 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 RNU6-491P-201ENST00000516099 110 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 RNU6-567P-201ENST00000516746 107 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AP004371.1-201ENST00000525240 214 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 MIR198-201ENST00000637333 62 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CHD7Q9P2D1 SNORA32.3-201ENST00000384772 121 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 MTCYBP34-201ENST00000439552 670 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 BX248409.1-201ENST00000455497 255 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 COX6CP6-201ENST00000490840 228 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CHD7Q9P2D1 RNA5SP112-201ENST00000515937 99 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AC104417.1-201ENST00000523974 751 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AL133241.1-201ENST00000556832 487 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 MIR548AX-201ENST00000580117 73 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 AL162730.1-201ENST00000605734 292 ntBASIC0.05□□□□□ -2.4
CHD7Q9P2D1 U3.20-201ENST00000390909 217 ntBASIC0.04□□□□□ -2.4
CHD7Q9P2D1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.04□□□□□ -2.4
CHD7Q9P2D1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.04□□□□□ -2.4
CHD7Q9P2D1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CHD7Q9P2D1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.04□□□□□ -2.4
CHD7Q9P2D1 AL355877.2-201ENST00000603670 358 ntBASIC0.04□□□□□ -2.4
CHD7Q9P2D1 AC073349.3-201ENST00000617616 186 ntBASIC0.04□□□□□ -2.4
CHD7Q9P2D1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.04□□□□□ -2.4
CHD7Q9P2D1 U8.7-201ENST00000364940 136 ntBASIC0.04□□□□□ -2.4
CHD7Q9P2D1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.04□□□□□ -2.4
CHD7Q9P2D1 UBE2D3P2-201ENST00000424409 445 ntBASIC0.04□□□□□ -2.4
CHD7Q9P2D1 AC010186.2-204ENST00000537668 439 ntBASIC0.04□□□□□ -2.4
CHD7Q9P2D1 AC005832.3-201ENST00000537929 631 ntBASIC0.04□□□□□ -2.4
CHD7Q9P2D1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.04□□□□□ -2.4
CHD7Q9P2D1 AC012414.6-201ENST00000568241 401 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms