Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
VSX1Q9NZR4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.43□□□□□ -1.86
VSX1Q9NZR4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 MIR372-201ENST00000362225 67 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 SNORA62-201ENST00000365493 153 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.459-201ENST00000384251 102 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 RNU6-166P-201ENST00000384371 107 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 SNORA70C-201ENST00000384538 135 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 RNU6-306P-201ENST00000384617 107 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 MIR10A-201ENST00000385043 110 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 MIR493-201ENST00000385254 89 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 SNORD73A-201ENST00000386062 65 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 MRPL42P3-201ENST00000401492 326 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 RPL21P65-201ENST00000406094 466 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AC007560.1-201ENST00000426912 237 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AL512844.2-201ENST00000433990 593 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 OR4C10P-201ENST00000434991 931 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 MTND3P2-201ENST00000438452 342 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AC124916.1-201ENST00000444020 547 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AC010265.1-201ENST00000513509 211 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 RNU6-572P-201ENST00000516724 80 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 RN7SKP289-201ENST00000517244 295 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AC109446.1-201ENST00000566172 220 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 MIR4782-201ENST00000577987 79 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 VN1R107P-201ENST00000601784 209 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AC008121.1-201ENST00000603244 268 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AL591034.3-201ENST00000605511 685 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 BRDTP1-201ENST00000605735 677 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 FTX_3.1-201ENST00000610451 147 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AC099778.2-201ENST00000610904 211 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AL138825.1-201ENST00000618587 192 ntBASIC3.42□□□□□ -1.86
VSX1Q9NZR4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.42□□□□□ -1.86
VSX1Q9NZR4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RPL9P7-201ENST00000330965 580 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-37P-201ENST00000362692 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-11P-201ENST00000364234 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-7-201ENST00000364784 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNA5SP97-201ENST00000365006 84 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-8-201ENST00000365467 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-25P-201ENST00000383873 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-1-201ENST00000383898 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-48P-201ENST00000384161 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-36P-201ENST00000384172 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-4P-201ENST00000384205 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-5P-201ENST00000384238 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-3P-201ENST00000384314 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-16P-201ENST00000384385 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-15P-201ENST00000384534 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-2-201ENST00000384627 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-29P-201ENST00000384637 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-9-201ENST00000384776 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-33P-201ENST00000384793 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AL591034.2-201ENST00000402839 359 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AL513475.1-201ENST00000406602 315 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-325P-201ENST00000411132 105 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RPL26P27-201ENST00000414397 437 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AC008267.5-201ENST00000424928 265 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AL513043.1-201ENST00000439124 535 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RPL21P23-201ENST00000446654 460 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 FTH1P25-201ENST00000447665 469 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AC013470.1-201ENST00000453438 462 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RPL9P9-202ENST00000466501 579 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AC022493.2-201ENST00000506122 481 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AC113155.1-201ENST00000511141 769 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RN7SKP209-201ENST00000516888 304 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.721-201ENST00000517207 102 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 TRAV32-201ENST00000553993 340 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 RNU6-6P-201ENST00000606623 107 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 AC244205.2-202ENST00000635781 342 ntBASIC3.41□□□□□ -1.86
VSX1Q9NZR4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
VSX1Q9NZR4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms