Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AL583843.1-201ENST00000456070 346 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AP004217.1-201ENST00000480579 346 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AL163973.1-201ENST00000484753 577 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC022493.1-201ENST00000492984 337 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 RAC1P5-201ENST00000512182 576 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC112206.3-201ENST00000514578 389 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 SNORA40.12-201ENST00000516329 111 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 BNIP3P6-201ENST00000549284 499 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 HMGB1P33-201ENST00000563485 527 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 MIR1273C-201ENST00000578669 77 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 BNIP3P30-201ENST00000601184 574 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC025165.5-201ENST00000602802 578 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC012119.1-201ENST00000603184 222 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AL020991.1-201ENST00000612314 373 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC005609.4-201ENST00000625071 447 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SPHK1Q9NYA1 NACAP2-201ENST00000318548 624 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 Y_RNA.6-201ENST00000362350 114 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 RNU6-1322P-201ENST00000364309 107 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 RNU6-715P-201ENST00000365204 103 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 MIR181A2-201ENST00000384863 110 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 SNORD115-47-201ENST00000391226 86 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 RNU6-903P-201ENST00000391270 109 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 ZNF885P-201ENST00000420174 1098 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC087499.2-201ENST00000432861 149 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AL360271.2-201ENST00000447710 161 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 GSTA11P-201ENST00000452866 669 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 GMFBP1-201ENST00000467831 427 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC083798.1-201ENST00000472671 131 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 RNA5SP401-201ENST00000515920 127 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 RNU6-1281P-201ENST00000516223 105 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 RNA5SP76-201ENST00000516277 87 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AP003033.1-201ENST00000527244 415 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 HIF1AP1-201ENST00000553642 175 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 GTF3AP2-201ENST00000557014 266 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC025678.1-201ENST00000567861 338 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AP001486.3-201ENST00000615334 372 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 AC002064.3-201ENST00000623448 346 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 MTND4P5-201ENST00000435821 1374 ntBASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SPHK1Q9NYA1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 ELF2P3-201ENST00000445099 1506 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RNU1-112P-201ENST00000364401 164 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 Y_RNA.255-201ENST00000364581 97 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RNU6-395P-201ENST00000365662 106 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RPL21P75-201ENST00000396599 483 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RPL21P28-201ENST00000401418 483 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AL356057.2-201ENST00000403318 432 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AL592114.1-201ENST00000403842 483 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RPS4XP7-201ENST00000406274 780 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RNU4-46P-201ENST00000410818 138 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RPL26P27-201ENST00000414397 437 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 MTCYBP5-201ENST00000423752 1135 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AC105272.1-201ENST00000438604 198 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 SNRPFP3-201ENST00000457792 225 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RPL21P39-201ENST00000463605 483 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RPL21P93-201ENST00000480465 489 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AC087190.1-201ENST00000484462 480 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AC093591.1-201ENST00000491435 481 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 RPL21P16-201ENST00000495531 483 ntBASIC2.7□□□□□ -1.98
SPHK1Q9NYA1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms