Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNU1-100P-201ENST00000365255 165 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AP002088.1-201ENST00000382740 395 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 MIR141-201ENST00000384975 95 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU6-1106P-201ENST00000390845 107 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 U3.39-201ENST00000408569 239 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU6-293P-201ENST00000411259 106 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC023141.4-201ENST00000412031 328 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RPS20P15-201ENST00000412792 311 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC125238.1-201ENST00000448842 249 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC006539.3-201ENST00000454258 129 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC006026.2-201ENST00000457376 180 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU6-1037P-201ENST00000459571 107 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC010618.1-201ENST00000469924 477 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC021205.2-201ENST00000480069 347 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC116337.1-201ENST00000509680 687 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU6-377P-201ENST00000515965 102 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 SCARNA14-201ENST00000516903 136 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU1-54P-201ENST00000517181 120 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 RNU6-711P-201ENST00000517255 106 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC006199.1-201ENST00000548728 219 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AL050343.2-201ENST00000607338 280 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 MIR6867-201ENST00000610636 67 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 AL161423.1-201ENST00000613700 262 ntBASIC3.64□□□□□ -1.83
MKS1Q9NXB0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.64□□□□□ -1.83
MKS1Q9NXB0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC068647.1-201ENST00000489539 2265 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 RN7SKP227-201ENST00000364445 330 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 RNA5SP515-201ENST00000364570 118 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.460-201ENST00000384255 102 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 RNU6-601P-201ENST00000384540 107 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 RPL21P65-201ENST00000406094 466 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.625-201ENST00000411256 107 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AL030996.1-201ENST00000411430 235 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC245054.2-201ENST00000415639 319 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AL353705.1-201ENST00000433468 480 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC236972.2-201ENST00000434979 310 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 SNORD19B-201ENST00000459623 84 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC010401.1-201ENST00000463867 348 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 SNORA43.2-201ENST00000516652 128 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 SNORA31.21-201ENST00000517180 77 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 TRMT10BP1-201ENST00000519377 943 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 MRPL49P2-201ENST00000521066 465 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC022695.1-201ENST00000522089 237 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC008011.1-201ENST00000545989 227 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 TRAV32-201ENST00000553993 340 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC020895.1-201ENST00000595362 272 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC024153.1-201ENST00000603103 365 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 ARF4P1-201ENST00000605447 541 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AL442067.2-201ENST00000614033 363 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC004852.3-201ENST00000614131 326 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC090574.1-201ENST00000623186 233 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 AC244517.12-201ENST00000623581 663 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 MIR3199-2-201ENST00000636243 86 ntBASIC3.63□□□□□ -1.83
MKS1Q9NXB0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
MKS1Q9NXB0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 MAPK10-322ENST00000641485 4530 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 Y_RNA.151-201ENST00000363566 112 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 SNORA14A-201ENST00000364773 135 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 RNU6-370P-201ENST00000411008 104 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AC245291.1-201ENST00000419501 328 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 RPS15AP10-201ENST00000432472 382 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 RPS15AP5-201ENST00000436276 388 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AC116655.1-201ENST00000508324 901 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 RNU6-581P-201ENST00000516214 105 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 RNU6-1016P-201ENST00000516689 94 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AC103996.1-201ENST00000555468 102 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AL121821.2-201ENST00000556081 394 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.62□□□□□ -1.83
MKS1Q9NXB0 MIR378J-201ENST00000611988 109 ntBASIC3.62□□□□□ -1.83
MKS1Q9NXB0 AC011890.2-201ENST00000613393 294 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 207.2 ms