Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 ZNF204P-201ENST00000416749 2397 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 AL079305.1-201ENST00000623159 3008 ntBASIC4.86□□□□□ -1.63
CUEDC1Q9NWM3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 SNORA63.4-201ENST00000362763 126 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-336P-201ENST00000364891 107 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 SNORA70.10-201ENST00000384515 134 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 SNORA66-201ENST00000384792 133 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 MIR32-201ENST00000384965 70 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 MIR10A-201ENST00000385043 110 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 RNY4P18-201ENST00000391107 89 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 PPIAP31-201ENST00000405422 495 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 ELOCP19-201ENST00000411919 318 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 RAB9AP3-201ENST00000412737 573 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 COX6B1P1-201ENST00000415962 213 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 RAB9AP1-201ENST00000449393 573 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AL353705.4-201ENST00000449661 238 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC005042.3-201ENST00000453230 174 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC091153.1-201ENST00000466297 402 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC010265.1-201ENST00000513509 211 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 SNORA25.12-201ENST00000516202 82 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 RNA5SP43-201ENST00000516559 110 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 RNA5SP291-201ENST00000517222 105 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC006254.2-201ENST00000603259 279 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AL161798.1-201ENST00000604630 131 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC068831.7-201ENST00000616954 363 ntBASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CUEDC1Q9NWM3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AL353743.1-202ENST00000431724 1695 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 FTLP6-201ENST00000355274 422 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-137P-201ENST00000363680 108 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 RNU5E-7P-201ENST00000365290 117 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 RNU6-1286P-201ENST00000383871 107 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 MIR493-201ENST00000385254 89 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 EIF1AXP1-201ENST00000419267 435 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC005154.2-201ENST00000438110 379 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 RPS29P9-201ENST00000440360 171 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 IFNA11P-201ENST00000446352 526 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AL354714.3-201ENST00000447284 493 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AL691482.1-201ENST00000453255 87 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 RN7SL441P-201ENST00000492388 296 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 COX6B1P5-201ENST00000509843 249 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 HMGB1P14-201ENST00000557424 591 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 MIR4284-201ENST00000578924 81 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC053481.4-201ENST00000583164 216 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC005176.2-201ENST00000596933 147 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC022441.3-201ENST00000605737 136 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC005296.1-201ENST00000616145 209 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 AC009541.1-201ENST00000438279 2662 ntBASIC4.84□□□□□ -1.63
CUEDC1Q9NWM3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CUEDC1Q9NWM3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CUEDC1Q9NWM3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CUEDC1Q9NWM3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
CUEDC1Q9NWM3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 RNU6-899P-201ENST00000363947 107 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 RNA5SP428-201ENST00000365129 132 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 RNU4-11P-201ENST00000365287 132 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 MIR23A-201ENST00000385245 73 ntBASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.83□□□□□ -1.64
CUEDC1Q9NWM3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms