Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 RPL23AP11-201ENST00000475260 469 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC018437.1-201ENST00000492214 406 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 SUB1P2-201ENST00000556401 297 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 PIGPP4-201ENST00000584447 307 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC008945.2-201ENST00000606056 604 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC091834.1-201ENST00000614543 472 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC011155.2-201ENST00000623202 216 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC244517.12-201ENST00000623581 663 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC006386.2-201ENST00000624491 75 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 AC012005.1-201ENST00000624575 75 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 MIR3529-201ENST00000637713 78 ntBASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.98□□□□□ -1.93
BLOC1S4Q9NUP1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-1120P-201ENST00000362988 108 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-371P-201ENST00000364283 108 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-116P-201ENST00000384042 109 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-1042P-201ENST00000384204 107 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-72P-201ENST00000384285 79 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 SNORD116-1-201ENST00000384335 95 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 MIR578-201ENST00000384828 96 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 CDK8P2-201ENST00000415020 547 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RPL21P90-201ENST00000415692 466 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AC004383.1-201ENST00000438135 289 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 MTCO1P19-201ENST00000443487 500 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 CACYBPP2-201ENST00000453625 678 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RPL36AP48-201ENST00000485521 314 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AC096576.1-201ENST00000489014 359 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 GTF3AP2-201ENST00000557014 266 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AC023824.2-201ENST00000566185 400 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AC006362.1-201ENST00000567392 174 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AC009163.5-201ENST00000575421 637 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 MIR4635-201ENST00000583759 79 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 ELOCP29-201ENST00000588193 334 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 RSL24D1P11-201ENST00000591045 491 ntBASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
BLOC1S4Q9NUP1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 OR4G2P-201ENST00000328113 903 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 RNU6-858P-201ENST00000362436 107 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 RNU5A-6P-201ENST00000384136 116 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 RNU6-550P-201ENST00000391057 101 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AL139039.1-201ENST00000401900 692 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 RN7SKP123-201ENST00000410732 291 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC016831.2-201ENST00000417179 352 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC093151.1-201ENST00000427711 313 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AL365400.1-201ENST00000431854 640 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AL360271.2-201ENST00000447710 161 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 MTND1P18-201ENST00000448191 573 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 MRPL42P6-201ENST00000486397 371 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC079140.5-201ENST00000507882 310 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC114781.4-201ENST00000513707 639 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 MIR892C-201ENST00000516410 77 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC010186.2-204ENST00000537668 439 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC106782.4-201ENST00000568264 210 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC105245.1-201ENST00000581934 244 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC245008.1-201ENST00000608123 476 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AC005609.4-201ENST00000625071 447 ntBASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.96□□□□□ -1.94
BLOC1S4Q9NUP1 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms