Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 USP9YP24-201ENST00000434374 697 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.27□□□□□ -2.21
CISHQ9NSE2 AC092001.1-201ENST00000453012 261 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.27□□□□□ -2.21
CISHQ9NSE2 AC093809.1-201ENST00000509155 340 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.27□□□□□ -2.21
CISHQ9NSE2 DEFB130C-202ENST00000530001 230 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 AC023538.1-201ENST00000534576 736 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.27□□□□□ -2.21
CISHQ9NSE2 AC093012.1-202ENST00000549403 582 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.27□□□□□ -2.21
CISHQ9NSE2 PSMA3P-201ENST00000555485 635 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.27□□□□□ -2.21
CISHQ9NSE2 MIR6134-201ENST00000617606 109 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 AC017037.3-201ENST00000625016 472 ntBASIC1.27□□□□□ -2.21
CISHQ9NSE2 RNU5E-1-201ENST00000362477 120 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 RNU1-57P-201ENST00000384491 166 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 MTCO1P56-201ENST00000401674 224 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL591034.2-201ENST00000402839 359 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL139397.2-201ENST00000404529 772 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC078974.1-201ENST00000411597 223 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 RPS15AP9-201ENST00000439856 381 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 OR6C5P-201ENST00000452388 923 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL137159.1-201ENST00000452808 512 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL163540.1-201ENST00000485382 386 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL354943.1-201ENST00000572103 781 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 MIR4498-201ENST00000577599 66 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC012360.2-201ENST00000609349 391 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL359314.1-201ENST00000616913 261 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC231657.1-201ENST00000624313 397 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AC006927.2-201ENST00000639256 389 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 AL163152.1-201ENST00000642001 374 ntBASIC1.26□□□□□ -2.21
CISHQ9NSE2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CISHQ9NSE2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CISHQ9NSE2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CISHQ9NSE2 RNU4-91P-201ENST00000364778 135 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 MIR29C-201ENST00000385231 88 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 RNA5SP465-201ENST00000391195 109 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 RPL21P24-201ENST00000413752 448 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 MTND1P31-201ENST00000449206 961 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 AC010631.1-201ENST00000474150 156 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 AC093852.1-201ENST00000503587 266 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 AC114801.2-201ENST00000503825 781 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 FAM206BP-201ENST00000510179 541 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 RNU6-581P-201ENST00000516214 105 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 RNU6-1183P-201ENST00000517054 60 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 ACA59.2-201ENST00000517061 156 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.25□□□□□ -2.21
CISHQ9NSE2 AC087897.1-201ENST00000550134 156 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 IMMP1LP2-201ENST00000552954 492 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 AL356432.3-201ENST00000568952 465 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 AC087045.1-201ENST00000605856 382 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 AC013470.4-201ENST00000619978 986 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 AL356094.1-201ENST00000624663 1212 ntBASIC1.25□□□□□ -2.21
CISHQ9NSE2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CISHQ9NSE2 RNU1-23P-201ENST00000363361 144 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 RNU5B-4P-201ENST00000363508 111 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 MTCO2P1-201ENST00000424648 477 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 C1DP1-201ENST00000426049 402 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 BRK1P2-201ENST00000442875 223 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 MTATP6P30-201ENST00000443540 664 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 SNRPFP4-201ENST00000456366 242 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC112771.1-201ENST00000463581 102 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC024589.1-201ENST00000512207 263 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 OR8K2P-201ENST00000524645 927 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC021171.1-201ENST00000603137 706 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.6-201ENST00000603753 252 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.11-201ENST00000604059 253 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 246 ms