Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNA5SP290-201ENST00000517133 127 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 MTND1P35-201ENST00000526739 508 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC008521.1-201ENST00000587471 187 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 BNIP3P9-201ENST00000603714 553 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AL138889.2-201ENST00000603883 242 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AL161798.1-201ENST00000604630 131 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AL138880.2-201ENST00000616214 239 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 MTND4P14-201ENST00000435799 1354 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 RPL9P7-201ENST00000330965 580 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 RNU6-552P-201ENST00000362869 119 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 RNY3P3-201ENST00000363816 102 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 RNU6-908P-201ENST00000410160 94 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 OR6C66P-201ENST00000414917 930 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AL139415.2-201ENST00000431968 163 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AL591704.1-201ENST00000432574 275 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 RPL23AP58-201ENST00000440453 469 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 PIGFP3-201ENST00000441918 722 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 RPL32P28-201ENST00000443577 397 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 CACYBPP2-201ENST00000453625 678 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AL162395.1-201ENST00000457882 422 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 RPS27P29-201ENST00000463110 252 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AC096725.1-201ENST00000514266 313 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AC068135.2-201ENST00000569293 1028 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 BNIP3P30-201ENST00000601184 574 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AL158032.1-201ENST00000605401 106 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 AC092608.2-201ENST00000624427 218 ntBASIC3.16□□□□□ -1.9
DDX4Q9NQI0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX4Q9NQI0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
DDX4Q9NQI0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
DDX4Q9NQI0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
DDX4Q9NQI0 RNU6-534P-201ENST00000364877 106 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 Y_RNA.381-201ENST00000365666 102 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 MIR301A-201ENST00000385261 86 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AL139397.2-201ENST00000404529 772 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 RNU6-193P-201ENST00000410977 107 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 MTND1P2-201ENST00000430604 821 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AL512844.2-201ENST00000433990 593 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 SNRPFP3-201ENST00000457792 225 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 RPL31P58-201ENST00000469001 379 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC128713.1-201ENST00000471495 306 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 RPL23AP11-201ENST00000475260 469 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC092989.1-201ENST00000481235 277 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 RPS15AP34-201ENST00000487776 387 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 EIF4EP3-201ENST00000498782 656 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC109927.2-201ENST00000506416 303 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 RNA5SP471-201ENST00000516971 106 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC109329.2-201ENST00000519658 482 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AP005435.4-201ENST00000529514 284 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 HMGB1P14-201ENST00000557424 591 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 DISC2.1-201ENST00000612827 205 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 AC027309.3-201ENST00000623419 351 ntBASIC3.15□□□□□ -1.91
DDX4Q9NQI0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
DDX4Q9NQI0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 Y_RNA.295-201ENST00000364918 102 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 SNORD37.1-201ENST00000390968 65 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 RNU6-550P-201ENST00000391057 101 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 RNU6-903P-201ENST00000391270 109 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 RNA5SP118-201ENST00000410385 109 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC092809.3-201ENST00000415453 231 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.14□□□□□ -1.91
DDX4Q9NQI0 MTCYBP8-201ENST00000422855 651 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AC092047.1-201ENST00000424997 240 ntBASIC3.14□□□□□ -1.91
DDX4Q9NQI0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms