Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.23□□□□□ -1.73
SSU72Q9NP77 AP000907.1-201ENST00000428428 510 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.23□□□□□ -1.73
SSU72Q9NP77 AL445305.1-201ENST00000432577 575 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RPL23AP81-201ENST00000455252 467 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RPL31P61-201ENST00000496160 376 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 AC008953.1-201ENST00000497334 318 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.23□□□□□ -1.73
SSU72Q9NP77 AF186190.1-201ENST00000517470 480 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.23□□□□□ -1.73
SSU72Q9NP77 CYCSP39-201ENST00000565821 309 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 AC091042.1-201ENST00000579213 173 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RPL23AP88-201ENST00000605759 454 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 SCARNA4-201ENST00000629045 128 ntBASIC4.23□□□□□ -1.73
SSU72Q9NP77 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SSU72Q9NP77 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSU72Q9NP77 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSU72Q9NP77 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSU72Q9NP77 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC022893.2-201ENST00000564832 3296 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SSU72Q9NP77 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSU72Q9NP77 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC233981.2-201ENST00000611524 1614 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 RNY4P28-201ENST00000365281 93 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 RNU6-741P-201ENST00000383889 107 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SSU72Q9NP77 RNA5SP332-201ENST00000391063 115 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 MIR548I2-201ENST00000408348 149 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 RNU2-68P-201ENST00000410878 191 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 EIF1P2-201ENST00000428233 350 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AL356867.1-201ENST00000429623 299 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AL591043.1-201ENST00000432461 424 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC007389.2-201ENST00000434630 306 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC009296.1-201ENST00000443146 155 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 CEACAMP7-201ENST00000444105 496 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC016700.2-201ENST00000446011 156 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AL162591.2-201ENST00000449634 317 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC074198.2-201ENST00000508153 258 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 Y_RNA.703-201ENST00000516846 111 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 RNA5SP34-201ENST00000516887 130 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AP006289.1-201ENST00000538089 277 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.22□□□□□ -1.73
SSU72Q9NP77 TRAV28-201ENST00000557548 323 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 RN7SL690P-201ENST00000582087 240 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC020914.4-201ENST00000597690 277 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 RN7SL722P-201ENST00000617780 284 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 RN7SL565P-201ENST00000618246 284 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.22□□□□□ -1.73
SSU72Q9NP77 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC241585.2-209ENST00000638217 143 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 AC139713.2-214ENST00000642059 1811 ntBASIC4.22□□□□□ -1.73
SSU72Q9NP77 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSU72Q9NP77 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.22□□□□□ -1.73
SSU72Q9NP77 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSU72Q9NP77 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.73
SSU72Q9NP77 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
SSU72Q9NP77 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 FAM35DP-201ENST00000323387 2712 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 RNU6-1159P-201ENST00000362933 107 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 RNU6-651P-201ENST00000411040 105 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 COX6CP10-201ENST00000416832 224 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 AL355433.1-201ENST00000422804 300 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 AL031659.1-201ENST00000447075 539 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 SNORA31.8-201ENST00000516327 108 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 RNU6-703P-201ENST00000516946 107 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 AP001781.1-201ENST00000530977 207 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 AC024405.2-202ENST00000532731 184 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 AP002392.1-201ENST00000537692 208 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 AC011921.3-201ENST00000605540 361 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 AC099506.2-201ENST00000623074 221 ntBASIC4.21□□□□□ -1.74
SSU72Q9NP77 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSU72Q9NP77 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.21□□□□□ -1.74
SSU72Q9NP77 AC090740.1-201ENST00000623193 2262 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SSU72Q9NP77 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSU72Q9NP77 RNU6-926P-201ENST00000384075 107 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 RNU6-378P-201ENST00000384324 107 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 Y_RNA.504-201ENST00000384481 104 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 BTF3L4P2-201ENST00000392798 346 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms