Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AL158211.1-201ENST00000566763 763 ntBASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AC145350.1-201ENST00000567426 208 ntBASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AC025678.1-201ENST00000567861 338 ntBASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 MIR3167-201ENST00000579623 85 ntBASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AL391813.1-201ENST00000603098 260 ntBASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AL359999.1-201ENST00000604513 294 ntBASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AP002360.4-201ENST00000606980 481 ntBASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AP000770.2-201ENST00000623694 100 ntBASIC1.84□□□□□ -2.11
HMG20AQ9NP66 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HMG20AQ9NP66 MTND4P4-201ENST00000439033 1366 ntBASIC1.84□□□□□ -2.12
HMG20AQ9NP66 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
HMG20AQ9NP66 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 RNU6-898P-201ENST00000365627 104 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 MIR218-1-201ENST00000384999 110 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 MT-TH-201ENST00000387441 69 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC006366.1-201ENST00000422002 759 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 RPL23AP30-201ENST00000432419 501 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC104850.1-201ENST00000435940 476 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC004383.1-201ENST00000438135 289 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AL022238.1-201ENST00000442557 355 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 OSTCP8-201ENST00000445117 448 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AL136380.1-201ENST00000447970 162 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 FABP5P13-201ENST00000452144 328 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC109927.2-201ENST00000506416 303 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 SNORA25.11-201ENST00000515935 105 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 RNU6-572P-201ENST00000516724 80 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 RNU6-677P-201ENST00000516914 101 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 SNORA31.18-201ENST00000517043 134 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 SNORA31.19-201ENST00000517079 126 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC022616.3-201ENST00000523940 148 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 CYCSP26-201ENST00000534107 320 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 MRPS36P5-201ENST00000551909 298 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 NACAP3-201ENST00000552100 481 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 SNRPGP18-201ENST00000553000 214 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 MTND3P12-201ENST00000559068 328 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC012414.6-201ENST00000568241 401 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC007151.1-201ENST00000572774 483 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC090897.2-201ENST00000581715 130 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC005771.1-201ENST00000585581 349 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC011939.3-201ENST00000613686 466 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 AC006020.1-201ENST00000420179 1854 ntBASIC1.83□□□□□ -2.12
HMG20AQ9NP66 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.82□□□□□ -2.12
HMG20AQ9NP66 Y_RNA.22-201ENST00000362492 102 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 U8.3-201ENST00000363321 132 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 RNU6-525P-201ENST00000363685 104 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 RNU6-190P-201ENST00000384154 102 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 Y_RNA.510-201ENST00000384511 114 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 RNU6-220P-201ENST00000390919 107 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 SNORA26.8-201ENST00000391306 124 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 MRPL42P2-201ENST00000403169 426 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 BTF3P7-201ENST00000407097 488 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 RNU6-1025P-201ENST00000410629 104 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 AC096649.2-201ENST00000416186 393 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 ELOCP4-201ENST00000420090 333 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.82□□□□□ -2.12
HMG20AQ9NP66 Z98742.2-201ENST00000431564 187 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 USP9YP15-201ENST00000442391 422 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 MTND6P13-201ENST00000443510 523 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.82□□□□□ -2.12
HMG20AQ9NP66 MTND3P7-201ENST00000474435 343 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.82□□□□□ -2.12
HMG20AQ9NP66 MTND1P22-201ENST00000510572 951 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.82□□□□□ -2.12
HMG20AQ9NP66 Y_RNA.672-201ENST00000516289 104 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 RNU7-51P-201ENST00000516560 62 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 SCARNA16.3-201ENST00000516595 184 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 RNU6-143P-201ENST00000516942 93 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 SCARNA11.3-201ENST00000517276 130 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.82□□□□□ -2.12
HMG20AQ9NP66 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.82□□□□□ -2.12
HMG20AQ9NP66 AC011979.2-201ENST00000527568 352 ntBASIC1.82□□□□□ -2.12
HMG20AQ9NP66 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms