Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC068944.2-201ENST00000610373 403 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 uc_338.5-201ENST00000611839 155 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC092656.1-203ENST00000624134 423 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC091965.5-201ENST00000624785 342 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC013437.2-201ENST00000639587 677 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 RNU6-1010P-201ENST00000362757 107 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 RNU5E-10P-201ENST00000363506 118 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 MIR670-201ENST00000390142 98 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 ELOCP17-201ENST00000414751 326 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 ELOCP9-201ENST00000418624 239 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 MTCO3P46-201ENST00000425787 232 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 RNA5SP57-201ENST00000459463 123 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 ANXA2P1-201ENST00000505539 926 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AP005660.1-201ENST00000522972 293 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AP004607.1-201ENST00000524456 203 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AP004247.1-201ENST00000531556 1289 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 MIR1273C-201ENST00000578669 77 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 DNAJC19P3-201ENST00000594491 331 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 BNIP3P30-201ENST00000601184 574 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 KC877982.1-201ENST00000602313 470 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AC026790.2-201ENST00000606282 430 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AC004908.3-201ENST00000610248 625 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AL132822.1-201ENST00000617063 513 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AC009269.6-201ENST00000621778 588 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 YWHAEP7-203ENST00000622054 312 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 AC090517.3-201ENST00000625170 141 ntBASIC1.54□□□□□ -2.16
VCX3AQ9NNX9 RNA5SP289-201ENST00000362332 137 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 Y_RNA.33-201ENST00000362591 102 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 RNU6-529P-201ENST00000363383 104 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 RNY3P13-201ENST00000365542 102 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 MIR29C-201ENST00000385231 88 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 RNU11-3P-201ENST00000391111 133 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 RNA5SP465-201ENST00000391195 109 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AL356967.1-201ENST00000406305 431 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 VN1R36P-201ENST00000414936 291 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AL606517.1-201ENST00000446914 387 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AL583843.1-201ENST00000456070 346 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 PRELID3BP1-201ENST00000457142 540 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC093899.1-201ENST00000457984 376 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC087276.1-201ENST00000529659 480 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC009063.1-201ENST00000563342 702 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC092325.1-201ENST00000566449 554 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AP000860.1-201ENST00000605250 559 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC012360.2-201ENST00000609349 391 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 AC108747.1-201ENST00000609508 535 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 uc_338.15-201ENST00000615470 191 ntBASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.53□□□□□ -2.16
VCX3AQ9NNX9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AL356292.1-201ENST00000283110 373 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 RNU1-62P-201ENST00000362599 164 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 RNU6-942P-201ENST00000363002 107 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 RNU6-843P-201ENST00000384454 104 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AL023284.1-201ENST00000403956 276 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 RNU4-53P-201ENST00000410828 140 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 RNA5SP501-201ENST00000410990 112 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 EIF4EP2-201ENST00000422816 654 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AL022400.1-201ENST00000423946 935 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AL356320.1-201ENST00000429616 163 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 HMGB3P12-201ENST00000438745 556 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 SNORD97-201ENST00000459187 142 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 RNU6-677P-201ENST00000516914 101 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AL160236.1-201ENST00000556317 195 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 MTCYBP23-201ENST00000558717 1102 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AC009097.3-201ENST00000563557 1018 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 MIR3944-201ENST00000581277 108 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 MIR15A-201ENST00000607334 83 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 AC091304.6-201ENST00000619761 202 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VCX3AQ9NNX9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 GNG5P1-201ENST00000255500 204 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 MIR126-201ENST00000362291 85 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 RNU6-1164P-201ENST00000364428 107 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 RNU6-546P-201ENST00000383991 107 ntBASIC1.51□□□□□ -2.17
VCX3AQ9NNX9 RNU6-611P-201ENST00000384276 104 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms