Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 UBE2V1P15-201ENST00000407776 448 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AL160275.3-201ENST00000423876 471 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 HMGN2P10-201ENST00000448085 265 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC109329.1-201ENST00000518744 317 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC022861.1-201ENST00000522981 663 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 MTCO3P15-201ENST00000526563 574 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 SNRPGP17-201ENST00000603780 214 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC012467.1-201ENST00000607740 256 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AL133445.2-201ENST00000611191 527 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC107982.1-201ENST00000507171 1300 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC091812.1-201ENST00000432235 1948 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 OR5T3-201ENST00000303059 1023 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-1207P-201ENST00000384343 107 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-1122P-201ENST00000384449 107 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 MIR218-1-201ENST00000384999 110 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AL590084.2-201ENST00000401481 382 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 USP9YP24-201ENST00000434374 697 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AL353706.1-201ENST00000436728 494 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 MTCO2P20-201ENST00000437339 673 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 RPS4XP11-201ENST00000446897 772 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC079776.3-201ENST00000450665 370 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 MTND4P21-201ENST00000453886 1357 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 TPRKBP1-201ENST00000456243 481 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 HIGD1AP17-201ENST00000554576 276 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AC079148.1-201ENST00000565944 819 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 MIR3912-201ENST00000577566 105 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 BNIP3P23-201ENST00000599655 511 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 MIR6515-201ENST00000619843 57 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 AL359740.1-201ENST00000624340 592 ntBASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
KIAA1549Q9HCM3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 RNU11-3P-201ENST00000391111 133 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC093852.1-201ENST00000503587 266 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC023825.1-201ENST00000566704 1030 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AL356432.3-201ENST00000568952 465 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC016925.2-201ENST00000605108 242 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AP005229.2-201ENST00000609980 697 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC107075.1-201ENST00000613695 314 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 MIR8084-201ENST00000614105 89 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 AC120349.2-201ENST00000625002 298 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.98□□□□□ -2.25
KIAA1549Q9HCM3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 RNY1P14-201ENST00000384426 108 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AC009310.1-201ENST00000414414 451 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 MTND2P29-201ENST00000438595 412 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AC012308.1-201ENST00000451232 178 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 RNU1-98P-201ENST00000458992 160 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 TMEM251P1-201ENST00000503717 318 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AC027338.1-201ENST00000514840 825 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-1102P-201ENST00000516149 96 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 PSMA3P-201ENST00000555485 635 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AL137100.2-201ENST00000555786 315 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AC003001.2-201ENST00000616294 831 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AP000676.3-201ENST00000623299 569 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 RNU1-58P-201ENST00000362413 163 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-1280P-201ENST00000365211 107 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 RNU1-39P-201ENST00000383897 165 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 BTF3P8-201ENST00000414577 526 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AC027644.1-201ENST00000419595 298 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 BX119904.4-201ENST00000424402 301 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 MTCO1P3-201ENST00000429327 192 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 GPM6BP2-201ENST00000432046 144 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 GPM6BP1-201ENST00000446387 144 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 AL121594.1-201ENST00000475906 575 ntBASIC0.97□□□□□ -2.25
KIAA1549Q9HCM3 RPS3AP22-201ENST00000488297 769 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms