Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 RNU6-212P-201ENST00000362642 104 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 U3.6-201ENST00000363622 211 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 RNA5SP72-201ENST00000364442 117 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 U3.13-201ENST00000364804 214 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 RNU6-166P-201ENST00000384371 107 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 PTMAP5-201ENST00000393073 333 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 MIR548I3-201ENST00000408378 149 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 MIR548I1-201ENST00000408810 149 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 RPEP5-201ENST00000441137 268 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 AL078601.1-201ENST00000444542 271 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 HIGD1AP2-201ENST00000446367 280 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 ANP32BP2-201ENST00000454525 545 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 AC108751.2-201ENST00000469993 231 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 KC877373.1-201ENST00000479066 408 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 HMGB1P35-201ENST00000503360 598 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 AC074250.1-201ENST00000511117 192 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 MIR6868-201ENST00000611215 58 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 SDR42E1P4-201ENST00000620894 481 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 AL359693.1-201ENST00000614959 2407 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 AP000560.1-201ENST00000624150 1937 ntBASIC4.72□□□□□ -1.65
ZFYVE28Q9HCC9 AC068254.2-201ENST00000623938 3577 ntBASIC4.71□□□□□ -1.65
ZFYVE28Q9HCC9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
ZFYVE28Q9HCC9 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.65
ZFYVE28Q9HCC9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.27-201ENST00000362540 103 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 RNU6-227P-201ENST00000362865 103 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 RNU6-428P-201ENST00000362942 107 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 RNU6-209P-201ENST00000384118 107 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 RNU6-708P-201ENST00000384217 107 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.518-201ENST00000384552 113 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 SNORD66.1-201ENST00000391230 76 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 RNU2-68P-201ENST00000410878 191 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AC139712.2-201ENST00000424302 339 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AL451050.1-201ENST00000450126 415 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AC092798.1-201ENST00000458542 409 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 Y_RNA.673-201ENST00000516306 88 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AC005476.1-201ENST00000554427 397 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AC005046.1-201ENST00000608515 625 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.71□□□□□ -1.66
ZFYVE28Q9HCC9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 RNU5E-7P-201ENST00000365290 117 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 RNU1-44P-201ENST00000384453 163 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 U8.11-201ENST00000384699 133 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 U8.12-201ENST00000384701 133 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 MIR190B-201ENST00000401119 79 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 HMGN2P31-201ENST00000432430 273 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 TBCAP1-201ENST00000436520 327 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 AC079354.2-201ENST00000453523 154 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 U8.18-201ENST00000459285 133 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 SNORA70.16-201ENST00000516390 95 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 MIR5684-201ENST00000585074 65 ntBASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.7□□□□□ -1.66
ZFYVE28Q9HCC9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms