Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL162578.1-201ENST00000406202 378 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 SNORA11.1-201ENST00000408133 129 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RNU2-33P-201ENST00000410344 192 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RNA5SP118-201ENST00000410385 109 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RN7SKP123-201ENST00000410732 291 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RNA5SP344-201ENST00000411081 104 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC022018.1-201ENST00000430685 241 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AL512844.2-201ENST00000433990 593 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RNA5SP310-201ENST00000459084 116 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 SUMO2P6-201ENST00000505273 288 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 CCDC34P1-201ENST00000507441 517 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC023050.3-201ENST00000541142 333 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC078814.3-201ENST00000553036 491 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 DNAJC8P1-201ENST00000554535 372 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AL118558.2-201ENST00000556294 238 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 MIR4424-201ENST00000585257 86 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC069234.5-201ENST00000611056 416 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 ATP5A1P2-202ENST00000616464 443 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC091953.5-201ENST00000622919 233 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC090617.10-201ENST00000624308 134 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AL008636.1-201ENST00000625038 1018 ntBASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDH9Q9HC56 AC233263.6-201ENST00000631132 1963 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RNU6-715P-201ENST00000365204 103 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 Y_RNA.534-201ENST00000384599 112 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 MIR181A2-201ENST00000384863 110 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 MIR512-1-201ENST00000384913 84 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 SNORA48.5-201ENST00000391143 135 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RPS4XP7-201ENST00000406274 780 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RNU4-26P-201ENST00000410270 107 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RNA5SP38-201ENST00000410750 119 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 EEF1A1P40-201ENST00000412883 573 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RPL21P90-201ENST00000415692 466 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RPL21P111-201ENST00000418453 477 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 TMEM167AP1-201ENST00000423409 219 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RPL23AP58-201ENST00000440453 469 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RPS24P13-201ENST00000442520 397 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 RPS15AP27-201ENST00000449183 343 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AL590639.1-201ENST00000456484 337 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 MTCO2P30-201ENST00000503662 364 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC009901.1-201ENST00000506703 541 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 TBCAP3-201ENST00000512475 312 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 LRRC34P2-201ENST00000514850 553 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 SNORA20.3-201ENST00000516880 132 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 BTF3P12-201ENST00000519620 469 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 TRAV28-201ENST00000557548 323 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC011712.1-201ENST00000588959 234 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC009570.1-201ENST00000609599 745 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC107871.2-201ENST00000612894 502 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC092794.2-201ENST00000620933 563 ntBASIC2.98□□□□□ -1.93
PCDH9Q9HC56 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PCDH9Q9HC56 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 Y_RNA.70-201ENST00000362886 110 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 Y_RNA.157-201ENST00000363638 102 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 RNU6-393P-201ENST00000384475 107 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 RNU6-1127P-201ENST00000384580 107 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 RPL35AP12-201ENST00000425362 338 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 SRIP2-201ENST00000428470 166 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 SAR1AP4-201ENST00000429225 591 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.97□□□□□ -1.93
PCDH9Q9HC56 MTND5P20-201ENST00000448677 143 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 PMCHL2-203ENST00000457791 237 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 RPL23AP11-201ENST00000475260 469 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 AC083904.1-201ENST00000487828 231 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 RNU6-507P-201ENST00000516045 100 ntBASIC2.97□□□□□ -1.93
PCDH9Q9HC56 RNA5SP76-201ENST00000516277 87 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms