Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AP000763.2-201ENST00000540641 163 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC005668.1-201ENST00000571142 476 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 MIR5692C1-201ENST00000585309 91 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC011471.1-201ENST00000585766 187 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 SNORD39.4-201ENST00000620099 78 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 MIR8057-201ENST00000620957 69 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 MIR1302-1-201ENST00000637932 143 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 ZNF807-201ENST00000328088 1707 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 AL035425.3-201ENST00000564206 4996 ntBASIC3.41□□□□□ -1.86
USP29Q9HBJ7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
USP29Q9HBJ7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.4□□□□□ -1.86
USP29Q9HBJ7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP29Q9HBJ7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.4□□□□□ -1.86
USP29Q9HBJ7 MIR148B-201ENST00000362252 99 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.58-201ENST00000362807 102 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.154-201ENST00000363624 102 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.212-201ENST00000364177 102 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 RNU6-1303P-201ENST00000364841 107 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 RNY3P1-201ENST00000365085 102 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 RNY3-201ENST00000365484 102 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 SNORA75B-201ENST00000384053 137 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.490-201ENST00000384413 102 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 RPS4XP7-201ENST00000406274 780 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 RPL21P90-201ENST00000415692 466 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AC022493.1-201ENST00000492984 337 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AC110794.1-201ENST00000505816 425 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 TBCAP3-201ENST00000512475 312 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 RNU6-256P-201ENST00000516747 97 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 TRAV37-201ENST00000553906 342 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 MIR1273C-201ENST00000578669 77 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 uc_338.1-201ENST00000612113 180 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 uc_338.15-201ENST00000615470 191 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 AL512643.1-201ENST00000635735 524 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 Z83843.1-201ENST00000604070 3685 ntBASIC3.4□□□□□ -1.87
USP29Q9HBJ7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
USP29Q9HBJ7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AC091152.2-201ENST00000591628 2569 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 RNU6-741P-201ENST00000383889 107 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 RNU6-1013P-201ENST00000384180 107 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 MIR493-201ENST00000385254 89 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 RNA5SP229-201ENST00000410809 99 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AC005300.1-201ENST00000428401 373 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AC006028.1-201ENST00000438379 402 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AC009237.8-201ENST00000445492 379 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 RPS15AP34-201ENST00000487776 387 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 MTCO1P29-201ENST00000496868 288 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 TRBVA-201ENST00000498804 316 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 MTND3P25-201ENST00000509243 135 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 RNU1-143P-201ENST00000516296 146 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 SNORA25.17-201ENST00000517184 124 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 TRAV28-201ENST00000557548 323 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 MIR3941-201ENST00000582572 103 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 MIR548AC-201ENST00000585049 88 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 POLR3GP2-201ENST00000588366 668 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AL050343.2-201ENST00000607338 280 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 U1.23-201ENST00000610293 146 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 AC099778.2-201ENST00000610904 211 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 RNU1-68P-201ENST00000615382 146 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 U1.39-201ENST00000621562 146 ntBASIC3.39□□□□□ -1.87
USP29Q9HBJ7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.39□□□□□ -1.87
USP29Q9HBJ7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms