Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RPL23AP78-201ENST00000599928 470 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 DEFB131E-202ENST00000602581 683 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 uc_338.25-201ENST00000613756 156 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 MIR6134-201ENST00000617606 109 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.99□□□□□ -1.93
POLR1BQ9H9Y6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 Y_RNA.409-201ENST00000383990 98 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 Y_RNA.505-201ENST00000384489 102 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 Y_RNA.516-201ENST00000384541 124 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 MIR578-201ENST00000384828 96 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-750P-201ENST00000390946 107 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AL356057.2-201ENST00000403318 432 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 RNA5SP229-201ENST00000410809 99 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AL353621.1-201ENST00000418219 243 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AL360271.2-201ENST00000447710 161 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 RPL23AP11-201ENST00000475260 469 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC113155.1-201ENST00000511141 769 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 RAC1P5-201ENST00000512182 576 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AL137161.1-201ENST00000532231 390 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 TPRKBP2-201ENST00000565969 475 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC012119.1-201ENST00000603184 222 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC087045.1-201ENST00000605856 382 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 AC092954.2-201ENST00000609103 430 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 ADAM3A-203ENST00000461344 2157 ntBASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
POLR1BQ9H9Y6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 Y_RNA.372-201ENST00000365599 102 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 SNORA75B-201ENST00000384053 137 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 SNORA54-201ENST00000384281 123 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-45P-201ENST00000384471 107 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-1179P-201ENST00000384667 107 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AL139039.1-201ENST00000401900 692 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-193P-201ENST00000410977 107 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 RPL21P90-201ENST00000415692 466 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 ATG3P1-201ENST00000419507 911 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 WASF1P1-201ENST00000447560 1131 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 NIPA2P5-201ENST00000452282 464 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 CACYBPP2-201ENST00000453625 678 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC010486.1-201ENST00000511793 424 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC091826.1-201ENST00000514065 313 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-56P-201ENST00000516986 93 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 HIF1AP1-201ENST00000553642 175 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 BNIP3P30-201ENST00000601184 574 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC093788.1-201ENST00000609356 927 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 RMST_4.1-201ENST00000616886 107 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 AC090617.7-201ENST00000623952 126 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 CDC27P3-201ENST00000635418 1910 ntBASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
POLR1BQ9H9Y6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
POLR1BQ9H9Y6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
POLR1BQ9H9Y6 Y_RNA.9-201ENST00000362354 101 ntBASIC2.96□□□□□ -1.94
POLR1BQ9H9Y6 RNU6-715P-201ENST00000365204 103 ntBASIC2.96□□□□□ -1.94
POLR1BQ9H9Y6 Z98749.2-208ENST00000381646 500 ntBASIC2.96□□□□□ -1.94
POLR1BQ9H9Y6 RNU6-434P-201ENST00000384376 107 ntBASIC2.96□□□□□ -1.94
POLR1BQ9H9Y6 MIR34A-201ENST00000385130 110 ntBASIC2.96□□□□□ -1.94
POLR1BQ9H9Y6 AL590002.1-201ENST00000406554 418 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms