Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
RNF38Q9H0F5 AC018555.1-201ENST00000567548 1980 ntBASIC4.13□□□□□ -1.75
RNF38Q9H0F5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 MIR23B-201ENST00000384832 97 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AL513331.1-201ENST00000411908 397 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 DAP3P1-201ENST00000441522 278 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AL500522.2-201ENST00000448562 343 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 MTND4LP30-201ENST00000454092 297 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 RPL39P38-201ENST00000467018 153 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 RN7SL585P-201ENST00000470538 280 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AC006517.1-201ENST00000480485 328 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 RPS26P15-201ENST00000488067 348 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 RN7SL323P-201ENST00000494712 295 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 SCARNA15.2-201ENST00000516409 127 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 RNU7-4P-201ENST00000516961 62 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AC087369.1-201ENST00000520775 996 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AC074050.1-201ENST00000563247 211 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AC123912.5-201ENST00000605470 343 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AL121917.1-203ENST00000605534 577 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AL591516.1-201ENST00000611326 274 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF38Q9H0F5 AL672296.1-201ENST00000427780 2158 ntBASIC4.12□□□□□ -1.75
RNF38Q9H0F5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF38Q9H0F5 RNU6-933P-201ENST00000384424 107 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 RNU6-1179P-201ENST00000384667 107 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 MIR625-201ENST00000385047 85 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 MIR1183-201ENST00000408856 89 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 NDUFB4P7-201ENST00000423198 363 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 AL451062.2-201ENST00000427515 271 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 AL592045.1-201ENST00000429867 352 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 RANP8-201ENST00000444720 713 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF38Q9H0F5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF38Q9H0F5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF38Q9H0F5 PPIAP15-201ENST00000479662 484 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 RNU6-1023P-201ENST00000516137 106 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF38Q9H0F5 CYP4A43P-201ENST00000568156 121 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 LRRC37A5P-203ENST00000580181 585 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 AC002545.1-201ENST00000592511 181 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 AL121772.2-201ENST00000614331 297 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF38Q9H0F5 AL512643.1-201ENST00000635735 524 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF38Q9H0F5 MTND5P6-201ENST00000422338 1798 ntBASIC4.11□□□□□ -1.75
RNF38Q9H0F5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF38Q9H0F5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC008568.2-201ENST00000623862 2313 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 RNU6-770P-201ENST00000363929 105 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.276-201ENST00000364732 109 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.324-201ENST00000365165 102 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.533-201ENST00000384596 114 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 Y_RNA.551-201ENST00000384661 102 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 RNU6-607P-201ENST00000411283 108 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 CYCSP33-201ENST00000414485 327 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 UBE2D3P2-201ENST00000424409 445 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC092423.1-201ENST00000430165 186 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 RN7SL271P-201ENST00000487601 295 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC093852.1-201ENST00000503587 266 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 SUMO2P6-201ENST00000505273 288 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC006499.6-201ENST00000511169 607 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 RNU6-1256P-201ENST00000516539 103 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 TRAV32-201ENST00000553993 340 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC004584.2-201ENST00000570407 410 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 MIR4444-1-201ENST00000581696 74 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 MIR4444-2-201ENST00000584390 74 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 VN1R91P-201ENST00000594377 169 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AL158827.2-201ENST00000602494 330 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AL691447.3-201ENST00000635020 330 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 Z99571.1-201ENST00000636677 394 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 AC012442.3-202ENST00000636742 206 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 U6.104-201ENST00000637979 90 ntBASIC4.1□□□□□ -1.75
RNF38Q9H0F5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF38Q9H0F5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms