Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE2OQ9C0C9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE2OQ9C0C9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.83□□□□□ -1.64
UBE2OQ9C0C9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE2OQ9C0C9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 MIR412-201ENST00000362142 91 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 SNORD14B-201ENST00000364533 90 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 Y_RNA.292-201ENST00000364904 97 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 Y_RNA.504-201ENST00000384481 104 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 SNORD78.2-201ENST00000391076 69 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 RNU6-1025P-201ENST00000410629 104 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 COX6B1P7-201ENST00000430845 235 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 PIGFP3-201ENST00000441918 722 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AC010469.1-201ENST00000463864 576 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 Y_RNA.662-201ENST00000516028 97 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 Y_RNA.706-201ENST00000516933 99 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 RNU6-143P-201ENST00000516942 93 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AC109479.2-201ENST00000517842 174 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AL161629.2-201ENST00000615347 275 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AC011476.5-201ENST00000615594 130 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 AL365265.1-201ENST00000621045 234 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 U6.106-201ENST00000636360 105 ntBASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
UBE2OQ9C0C9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AL161912.2-201ENST00000565707 3007 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AL451142.2-201ENST00000429076 2090 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 MAPK10-286ENST00000641208 8747 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 RNU6-1301P-201ENST00000362724 104 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 Y_RNA.383-201ENST00000383855 97 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 RNU6-804P-201ENST00000384286 107 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AL033519.2-201ENST00000403958 392 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AL158156.1-201ENST00000422509 473 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 RN7SL691P-201ENST00000494487 301 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AC067852.4-201ENST00000590314 478 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AL161798.1-201ENST00000604630 131 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AP001485.1-201ENST00000604799 199 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 BRDTP1-201ENST00000605735 677 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AC087190.4-201ENST00000574616 8334 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 AC009812.4-201ENST00000569134 1805 ntBASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBE2OQ9C0C9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 RNA5SP124-201ENST00000362739 110 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 RNU1-83P-201ENST00000363426 164 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 SNORA73.2-201ENST00000364946 201 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 RNU6-1027P-201ENST00000383998 107 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 SNORD63-201ENST00000384262 68 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AL358453.1-201ENST00000422522 250 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AL590399.6-201ENST00000446396 307 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AK3P2-201ENST00000507976 429 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 RNU7-175P-201ENST00000515915 61 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AC008694.2-201ENST00000517591 306 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AC022790.1-201ENST00000522872 204 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AC090617.3-201ENST00000573670 475 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 MIR3144-201ENST00000579460 79 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AL162424.1-201ENST00000602325 221 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AC005046.1-201ENST00000608515 625 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AC015813.4-201ENST00000610469 179 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 AL391261.4-201ENST00000616012 481 ntBASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
UBE2OQ9C0C9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms