Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC016957.1-201ENST00000534895 309 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AF038458.1-201ENST00000588406 262 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AL161798.1-201ENST00000604630 131 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC022202.1-201ENST00000613515 211 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC022709.1-201ENST00000615967 87 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AL109620.1-201ENST00000618738 1197 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 AC138627.2-201ENST00000624202 601 ntBASIC1.67□□□□□ -2.14
UPF3BQ9BZI7 OR4G1P-203ENST00000641984 1631 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 NACAP2-201ENST00000318548 624 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 RNU6-114P-201ENST00000384704 105 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AC007098.1-201ENST00000420122 367 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AC244505.5-201ENST00000443639 207 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 KATNBL1P6-201ENST00000453433 915 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 RNU1-98P-201ENST00000458992 160 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AF131216.2-201ENST00000512316 564 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AP004607.1-201ENST00000524456 203 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 OR6C7P-201ENST00000547875 934 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 SNRPGP1-201ENST00000553864 222 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 MIR4713-201ENST00000582691 75 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AC004987.4-201ENST00000603383 338 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 AC008121.3-201ENST00000618726 433 ntBASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UPF3BQ9BZI7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 BX119904.4-201ENST00000424402 301 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 GTF2IP3-201ENST00000433887 494 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 AL353706.1-201ENST00000436728 494 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 SNRPGP13-201ENST00000442212 177 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 AL096829.2-201ENST00000446582 742 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 RPL18AP17-201ENST00000455326 198 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 RPS29P29-201ENST00000456396 171 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 RPS15AP36-201ENST00000492022 382 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 AC012213.3-201ENST00000577199 777 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 BNIP3P25-201ENST00000596023 559 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 AC091057.3-201ENST00000602684 733 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 SNRPGP17-201ENST00000603780 214 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 CDC27P3-201ENST00000635418 1910 ntBASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UPF3BQ9BZI7 AC121333.1-201ENST00000567488 2709 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 RNU6-37P-201ENST00000362692 107 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 RNU6-11P-201ENST00000364234 107 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 AC244035.1-201ENST00000430042 390 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 GPM6BP2-201ENST00000432046 144 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 AC010153.1-201ENST00000432862 727 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 GPM6BP1-201ENST00000446387 144 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 AC018868.1-201ENST00000491307 315 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 RNU6-1225P-201ENST00000516336 65 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 RN7SKP258-201ENST00000517151 304 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 AC023158.2-201ENST00000614876 543 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 AC078880.5-201ENST00000617845 421 ntBASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
UPF3BQ9BZI7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 U8.1-201ENST00000362843 134 ntBASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 RNU2-42P-201ENST00000410697 113 ntBASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 HSPE1P21-201ENST00000438283 308 ntBASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 AC093752.1-206ENST00000511823 336 ntBASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 SNORA4.4-201ENST00000515921 135 ntBASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 AC104417.1-201ENST00000523974 751 ntBASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 MIR3198-2-201ENST00000577868 80 ntBASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 BBIP1P1-201ENST00000602999 279 ntBASIC1.63□□□□□ -2.15
UPF3BQ9BZI7 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 AP000776.1-201ENST00000530032 1663 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 RNU5E-1-201ENST00000362477 120 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 MIR598-201ENST00000384868 97 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 MIR29C-201ENST00000385231 88 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 UBE2FP1-201ENST00000416536 447 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms