Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RPS27AP12-201ENST00000429552 465 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC098934.3-201ENST00000430450 190 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 SNRPGP10-201ENST00000432323 225 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MTATP6P21-201ENST00000440681 189 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RPS12P18-201ENST00000442381 270 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC096638.1-201ENST00000444678 216 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC073264.2-201ENST00000448886 166 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AL353705.4-201ENST00000449661 238 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 snoU13.30-201ENST00000458951 104 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC146507.2-201ENST00000460608 476 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC078817.1-201ENST00000492623 435 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC139453.3-201ENST00000493276 369 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 KRTAP5-14P-201ENST00000502328 121 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC093729.1-201ENST00000513074 128 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-27P-201ENST00000516146 107 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RN7SKP276-201ENST00000516242 268 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RN7SKP260-201ENST00000516907 149 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC009163.5-201ENST00000575421 637 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR3667-201ENST00000581025 74 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR4737-201ENST00000583979 81 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC009314.1-201ENST00000603871 304 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC093732.2-201ENST00000607950 274 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AL450472.3-201ENST00000615578 367 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AL137067.1-201ENST00000615933 120 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR6853-201ENST00000619642 74 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC000123.2-201ENST00000623124 461 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC112484.5-201ENST00000624189 228 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC005332.5-201ENST00000591222 2919 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-832P-201ENST00000363319 107 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-97P-201ENST00000363387 104 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RN7SKP113-201ENST00000363891 295 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU1-32P-201ENST00000363937 159 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU4-9P-201ENST00000364951 139 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.379-201ENST00000365653 102 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-1286P-201ENST00000383871 107 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR659-201ENST00000384963 97 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 MT-TI-201ENST00000387365 69 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RPL21P17-201ENST00000397467 475 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 HLFP1-201ENST00000402375 499 ntBASIC1.66□□□□□ -2.14
KRTAP4-3Q9BYR4 RPS16P5-201ENST00000406501 404 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms