Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC017104.5-201ENST00000637647 639 ntBASIC0.81□□□□□ -2.28
SCAPERQ9BY12 RNU6-486P-201ENST00000363116 107 ntBASIC0.8□□□□□ -2.28
SCAPERQ9BY12 VTRNA1-3-201ENST00000365645 89 ntBASIC0.8□□□□□ -2.28
SCAPERQ9BY12 RNU6-921P-201ENST00000384361 107 ntBASIC0.8□□□□□ -2.28
SCAPERQ9BY12 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.8□□□□□ -2.28
SCAPERQ9BY12 AC068135.1-201ENST00000446164 246 ntBASIC0.8□□□□□ -2.28
SCAPERQ9BY12 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.8□□□□□ -2.28
SCAPERQ9BY12 RPL26P9-201ENST00000457466 433 ntBASIC0.8□□□□□ -2.28
SCAPERQ9BY12 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SCAPERQ9BY12 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SCAPERQ9BY12 RNA5SP395-201ENST00000516567 118 ntBASIC0.8□□□□□ -2.28
SCAPERQ9BY12 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.8□□□□□ -2.28
SCAPERQ9BY12 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SCAPERQ9BY12 AC243829.6-201ENST00000612652 106 ntBASIC0.8□□□□□ -2.28
SCAPERQ9BY12 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.8□□□□□ -2.28
SCAPERQ9BY12 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.8□□□□□ -2.28
SCAPERQ9BY12 RNU5A-1-201ENST00000362698 116 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 Y_RNA.458-201ENST00000384240 102 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 RNU2-70P-201ENST00000410718 179 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 AL160275.3-201ENST00000423876 471 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.79□□□□□ -2.28
SCAPERQ9BY12 AL512637.2-201ENST00000431287 1256 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 USP9YP35-201ENST00000435696 412 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.79□□□□□ -2.28
SCAPERQ9BY12 AC092685.1-201ENST00000447960 1243 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 ARPC3P5-201ENST00000448802 534 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 AC113420.1-201ENST00000507903 571 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 OR6C7P-201ENST00000547875 934 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 AC138473.1-201ENST00000605717 526 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 AC009318.4-201ENST00000620496 486 ntBASIC0.79□□□□□ -2.28
SCAPERQ9BY12 RNU6-251P-201ENST00000363235 104 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 RNU2-43P-201ENST00000410306 190 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.78□□□□□ -2.28
SCAPERQ9BY12 UBE2V1P4-201ENST00000425374 344 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 UBE2V2P3-201ENST00000433562 437 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 Z82210.1-201ENST00000440037 231 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 SCARNA15.2-201ENST00000516409 127 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 RNU11-2P-201ENST00000516898 142 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 HSPA8P13-201ENST00000523715 472 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 AC036111.3-201ENST00000526389 112 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.78□□□□□ -2.28
SCAPERQ9BY12 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
SCAPERQ9BY12 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.78□□□□□ -2.28
SCAPERQ9BY12 U1.36-201ENST00000620684 176 ntBASIC0.78□□□□□ -2.28
SCAPERQ9BY12 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SCAPERQ9BY12 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SCAPERQ9BY12 MIR561-201ENST00000385216 97 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 MIR92A1-201ENST00000385233 78 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 MIR888-201ENST00000401186 77 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.77□□□□□ -2.29
SCAPERQ9BY12 BEND7P1-201ENST00000422058 457 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 RPP40P1-201ENST00000426762 456 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.77□□□□□ -2.29
SCAPERQ9BY12 CYP2C59P-201ENST00000457790 269 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.77□□□□□ -2.29
SCAPERQ9BY12 AC136932.1-201ENST00000574771 208 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.77□□□□□ -2.29
SCAPERQ9BY12 AC011374.2-201ENST00000607135 526 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 FTX_3.1-201ENST00000610451 147 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 uc_338.14-201ENST00000613162 166 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 AC106800.4-201ENST00000614905 153 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.77□□□□□ -2.29
SCAPERQ9BY12 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SCAPERQ9BY12 AL359854.1-201ENST00000614203 1594 ntBASIC0.77□□□□□ -2.29
SCAPERQ9BY12 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SCAPERQ9BY12 MTND5P11-201ENST00000511037 1812 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.76□□□□□ -2.29
SCAPERQ9BY12 MIR135A2-201ENST00000384854 100 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SCAPERQ9BY12 FTH1P15-201ENST00000406984 280 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.76□□□□□ -2.29
SCAPERQ9BY12 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.76□□□□□ -2.29
SCAPERQ9BY12 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.76□□□□□ -2.29
SCAPERQ9BY12 AC112492.4-201ENST00000456549 352 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.76□□□□□ -2.29
SCAPERQ9BY12 AC093677.1-201ENST00000514414 678 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 RNU6-1256P-201ENST00000516539 103 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 AC005668.1-201ENST00000571142 476 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 BX322635.1-201ENST00000605804 496 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 MIR5087-201ENST00000635826 76 ntBASIC0.76□□□□□ -2.29
SCAPERQ9BY12 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SCAPERQ9BY12 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
SCAPERQ9BY12 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
SCAPERQ9BY12 SNORA25B-201ENST00000365507 128 ntBASIC0.75□□□□□ -2.29
SCAPERQ9BY12 BPY2DP-201ENST00000422208 265 ntBASIC0.75□□□□□ -2.29
SCAPERQ9BY12 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.75□□□□□ -2.29
SCAPERQ9BY12 RPL9P9-202ENST00000466501 579 ntBASIC0.75□□□□□ -2.29
SCAPERQ9BY12 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.75□□□□□ -2.29
SCAPERQ9BY12 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.75□□□□□ -2.29
SCAPERQ9BY12 RNU6-902P-201ENST00000517212 91 ntBASIC0.75□□□□□ -2.29
SCAPERQ9BY12 HIGD1AP6-201ENST00000521833 279 ntBASIC0.75□□□□□ -2.29
SCAPERQ9BY12 AC016542.1-201ENST00000608259 493 ntBASIC0.75□□□□□ -2.29
SCAPERQ9BY12 ZNF680P1-201ENST00000436625 1469 ntBASIC0.75□□□□□ -2.29
SCAPERQ9BY12 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SCAPERQ9BY12 MIR518D-201ENST00000385014 87 ntBASIC0.74□□□□□ -2.29
SCAPERQ9BY12 AL139098.1-201ENST00000407291 389 ntBASIC0.74□□□□□ -2.29
SCAPERQ9BY12 BTF3P8-201ENST00000414577 526 ntBASIC0.74□□□□□ -2.29
SCAPERQ9BY12 AL161788.1-201ENST00000441805 169 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms