Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL713866.2-201ENST00000603579 219 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL670379.6-201ENST00000603753 252 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 MTND3P19-201ENST00000603825 345 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL670379.11-201ENST00000604059 253 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL358072.1-201ENST00000604156 575 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC008162.1-201ENST00000604718 254 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC007363.1-201ENST00000604736 620 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL670379.1-201ENST00000604752 252 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL670379.5-201ENST00000605253 252 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL670379.12-201ENST00000605291 253 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL670379.8-201ENST00000605353 252 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL670379.7-201ENST00000605823 252 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC107952.2-201ENST00000606048 486 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL356596.1-201ENST00000624230 379 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC091965.5-201ENST00000624785 342 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AL512643.1-201ENST00000635735 524 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 Z99571.1-201ENST00000636677 394 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 AC241585.2-209ENST00000638217 143 ntBASIC1.32□□□□□ -2.2
UPK3BQ9BT76 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK3BQ9BT76 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 SNORD114-19-201ENST00000363072 75 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 SNORA4.1-201ENST00000364263 144 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 MTND6P13-201ENST00000443510 523 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC007677.1-201ENST00000445757 515 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 KATNBL1P6-201ENST00000453433 915 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 SNORA31.19-201ENST00000517079 126 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC034114.1-201ENST00000520293 285 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC068587.4-201ENST00000533893 186 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC007375.1-201ENST00000554513 578 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 MIR4299-201ENST00000577899 72 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 MIR544B-201ENST00000582372 78 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 KC877982.1-201ENST00000602313 470 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AL592221.1-201ENST00000605266 382 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AL773524.1-201ENST00000614065 229 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 FRG1KP-201ENST00000623592 341 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AL359757.2-201ENST00000624309 274 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK3BQ9BT76 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.31□□□□□ -2.2
UPK3BQ9BT76 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AL356292.1-201ENST00000283110 373 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 RNU4-68P-201ENST00000364314 141 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 RNU6-769P-201ENST00000384407 104 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 MIR518A2-201ENST00000384966 87 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 RNU4-22P-201ENST00000411058 166 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 RNA5SP450-201ENST00000411206 102 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 RPS20P15-201ENST00000412792 311 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AL158823.1-201ENST00000418441 478 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AL445685.2-201ENST00000422551 342 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 TIMM9P1-201ENST00000436122 256 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 IFNA20P-201ENST00000436840 528 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AL078601.1-201ENST00000444542 271 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 SNORD97-201ENST00000459187 142 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AC116337.1-201ENST00000509680 687 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AP004247.1-201ENST00000531556 1289 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 OR5B19P-201ENST00000531766 928 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 OR5AL2P-201ENST00000532185 920 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 HSBP1P1-201ENST00000555205 166 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 MTCYBP23-201ENST00000558717 1102 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AC110588.1-201ENST00000559699 137 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AC136618.2-201ENST00000575091 400 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 MIR4524B-201ENST00000581569 115 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AC025811.1-201ENST00000604312 472 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AL355472.4-201ENST00000610233 626 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 AC004808.1-201ENST00000627671 721 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK3BQ9BT76 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.3□□□□□ -2.2
UPK3BQ9BT76 RNU6-858P-201ENST00000362436 107 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 MIR518D-201ENST00000385014 87 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 SNORA40C-201ENST00000391285 128 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 RNU2-62P-201ENST00000410868 191 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 ELOCP17-201ENST00000414751 326 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms