Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-1266P-201ENST00000362794 105 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 SNORA71.2-201ENST00000364941 134 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 RNU5E-7P-201ENST00000365290 117 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 VDAC1P3-201ENST00000434069 851 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 RPL23AP22-201ENST00000437556 453 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AC124916.1-201ENST00000444020 547 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 TPT1P12-201ENST00000448968 492 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AC012671.1-201ENST00000451912 203 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AL645939.1-201ENST00000453429 797 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AL136097.1-201ENST00000456945 913 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AC010326.1-201ENST00000462726 602 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 ANXA2P1-201ENST00000505539 926 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AC010186.2-204ENST00000537668 439 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AC136932.1-201ENST00000574771 208 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 MIR6758-201ENST00000620653 63 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AC007546.2-201ENST00000623996 360 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 U4.7-201ENST00000638126 106 ntBASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM56Q9BRZ2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 AL157777.2-201ENST00000258070 137 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-428P-201ENST00000362942 107 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.123-201ENST00000363338 102 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.277-201ENST00000364754 102 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 SNORA62-201ENST00000365493 153 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.581-201ENST00000391017 97 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-1197P-201ENST00000391183 107 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 RPS20P14-201ENST00000412545 360 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 AL732292.1-201ENST00000426692 226 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 MTATP6P7-201ENST00000453315 681 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 RN7SL385P-201ENST00000468873 276 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 AC034236.1-201ENST00000469891 373 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-703P-201ENST00000516946 107 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 ZNF192P1-203ENST00000565888 810 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 MIR4782-201ENST00000577987 79 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 MIR4284-201ENST00000578924 81 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 AC023575.1-201ENST00000580510 358 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 AC090740.1-201ENST00000623193 2262 ntBASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM56Q9BRZ2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.143-201ENST00000363520 106 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RNA5SP167-201ENST00000365461 116 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-746P-201ENST00000384112 109 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RNU6-886P-201ENST00000384319 105 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RNA5SP332-201ENST00000391063 115 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 SNORD78.2-201ENST00000391076 69 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 BTF3L4P2-201ENST00000392798 346 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 Y_RNA.793-201ENST00000411222 111 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RPL7AP25-201ENST00000423357 805 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RPL18P10-201ENST00000425606 538 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 NDUFB4P10-201ENST00000452541 359 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 AC139453.3-201ENST00000493276 369 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RNA5SP154-201ENST00000516193 111 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 AP004242.1-201ENST00000533701 349 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 AL138721.1-201ENST00000616756 179 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 AC091903.1-201ENST00000624322 454 ntBASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM56Q9BRZ2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.46□□□□□ -1.69
TRIM56Q9BRZ2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
TRIM56Q9BRZ2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM56Q9BRZ2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
TRIM56Q9BRZ2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RNU6-50P-201ENST00000362356 103 ntBASIC4.46□□□□□ -1.7
TRIM56Q9BRZ2 RNA5SP307-201ENST00000362863 116 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms