Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL022161.1-201ENST00000604390 213 ntBASIC1.92□□□□□ -2.1
FOXC2Q99958 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.92□□□□□ -2.1
FOXC2Q99958 AC122133.1-201ENST00000613964 233 ntBASIC1.92□□□□□ -2.1
FOXC2Q99958 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.92□□□□□ -2.1
FOXC2Q99958 AC092140.2-201ENST00000618027 521 ntBASIC1.92□□□□□ -2.1
FOXC2Q99958 AL603755.1-201ENST00000619504 163 ntBASIC1.92□□□□□ -2.1
FOXC2Q99958 AL356266.1-201ENST00000623311 483 ntBASIC1.92□□□□□ -2.1
FOXC2Q99958 AC012640.5-201ENST00000623897 319 ntBASIC1.92□□□□□ -2.1
FOXC2Q99958 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AC069528.2-201ENST00000624849 1991 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AL445523.1-201ENST00000451184 1362 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
FOXC2Q99958 RNU5F-6P-201ENST00000362979 116 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 RNU1-17P-201ENST00000363022 152 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 Y_RNA.269-201ENST00000364685 89 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXC2Q99958 MIR144-201ENST00000384886 86 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXC2Q99958 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXC2Q99958 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AC098826.2-201ENST00000452011 651 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXC2Q99958 RN7SKP210-201ENST00000459176 261 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AP001324.2-201ENST00000461163 319 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AC010486.2-201ENST00000505572 483 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AF213884.2-201ENST00000510417 903 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.91□□□□□ -2.1
FOXC2Q99958 RNA5SP82-201ENST00000516707 92 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC026407.1-201ENST00000518369 204 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC106038.2-201ENST00000520706 568 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.91□□□□□ -2.1
FOXC2Q99958 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AL356432.3-201ENST00000568952 465 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC023043.2-201ENST00000589678 1026 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 NIFKP6-201ENST00000598115 845 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC067747.1-201ENST00000608026 250 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC108747.1-201ENST00000609508 535 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC138749.5-201ENST00000611461 208 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC116165.2-201ENST00000616705 206 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
FOXC2Q99958 AC091304.6-201ENST00000619761 202 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 AC244517.12-201ENST00000623581 663 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.91□□□□□ -2.1
FOXC2Q99958 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
FOXC2Q99958 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
FOXC2Q99958 RNU6-701P-201ENST00000384059 107 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.9□□□□□ -2.11
FOXC2Q99958 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 EIF4EP4-201ENST00000424916 578 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.9□□□□□ -2.11
FOXC2Q99958 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.9□□□□□ -2.11
FOXC2Q99958 TIMM9P1-201ENST00000436122 256 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 CR769767.1-201ENST00000436337 346 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.9□□□□□ -2.11
FOXC2Q99958 AC118469.1-201ENST00000442943 488 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 NEFMP1-201ENST00000443423 1006 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AC124916.1-201ENST00000444020 547 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 ZNF114P1-201ENST00000453500 292 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AL441985.1-201ENST00000457727 251 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AC068781.1-201ENST00000488231 618 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 RPL22P13-201ENST00000493291 347 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.9□□□□□ -2.11
FOXC2Q99958 AC008526.1-201ENST00000509149 338 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.9□□□□□ -2.11
FOXC2Q99958 RNU6-581P-201ENST00000516214 105 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 SNORA31.11-201ENST00000516528 139 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 RNU6-143P-201ENST00000516942 93 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
FOXC2Q99958 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.9□□□□□ -2.11
FOXC2Q99958 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.9□□□□□ -2.11
FOXC2Q99958 AC123904.2-201ENST00000548059 300 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 ZNF519P3-201ENST00000557158 1032 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.9□□□□□ -2.11
FOXC2Q99958 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.9□□□□□ -2.11
FOXC2Q99958 MIR5697-201ENST00000578045 78 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 MIR3915-201ENST00000578518 97 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 MIR3118-1-201ENST00000581787 76 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AL358072.1-201ENST00000604156 575 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.9□□□□□ -2.11
FOXC2Q99958 AC103710.2-201ENST00000609912 942 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AC090970.3-201ENST00000612566 866 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AL161423.1-201ENST00000613700 262 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 MIR6134-201ENST00000617606 109 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 MIR6132-201ENST00000622083 109 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 AP003400.5-201ENST00000624827 617 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 U6.99-201ENST00000637524 83 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.9□□□□□ -2.11
FOXC2Q99958 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
FOXC2Q99958 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
FOXC2Q99958 MIR337-201ENST00000362281 93 ntBASIC1.89□□□□□ -2.11
FOXC2Q99958 RNU4-21P-201ENST00000362802 126 ntBASIC1.89□□□□□ -2.11
FOXC2Q99958 RNU4-1-201ENST00000363925 141 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms