Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 AL512506.2-201ENST00000624472 458 ntBASIC0.3□□□□□ -2.36
PCNX1Q96RV3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 RPS3AP36-201ENST00000398190 775 ntBASIC0.3□□□□□ -2.36
PCNX1Q96RV3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 CR769776.1-201ENST00000441254 787 ntBASIC0.3□□□□□ -2.36
PCNX1Q96RV3 ARPC3P5-201ENST00000448802 534 ntBASIC0.3□□□□□ -2.36
PCNX1Q96RV3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 RNY1P9-201ENST00000532431 109 ntBASIC0.3□□□□□ -2.36
PCNX1Q96RV3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 AL355877.2-201ENST00000603670 358 ntBASIC0.3□□□□□ -2.36
PCNX1Q96RV3 AL590410.1-201ENST00000617925 333 ntBASIC0.3□□□□□ -2.36
PCNX1Q96RV3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.3□□□□□ -2.36
PCNX1Q96RV3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 RNU6-272P-201ENST00000411028 104 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 PIGFP2-201ENST00000421400 651 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 AC099513.1-201ENST00000490423 301 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 HMGB1P35-201ENST00000503360 598 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 SCARNA3-201ENST00000517097 143 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 BNIP3P16-201ENST00000589779 534 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 AL021997.1-201ENST00000605757 193 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 RNU5D-1-201ENST00000363299 116 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 Y_RNA.413-201ENST00000384007 102 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 SNORA51.6-201ENST00000384151 125 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 RNU6-1184P-201ENST00000384588 108 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 RN7SKP142-201ENST00000411236 328 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 AC006548.1-201ENST00000427470 102 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 Y_RNA.754-201ENST00000476024 102 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 MIR892C-201ENST00000516410 77 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 Y_RNA.790-201ENST00000614282 102 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 Y_RNA.782-201ENST00000614695 102 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 CR381572.1-201ENST00000625098 102 ntBASIC0.29□□□□□ -2.36
PCNX1Q96RV3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.29□□□□□ -2.36
PCNX1Q96RV3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
PCNX1Q96RV3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
PCNX1Q96RV3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
PCNX1Q96RV3 RNA5SP205-201ENST00000364653 136 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 RNU6-26P-201ENST00000383985 107 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 RNU6-1083P-201ENST00000384022 107 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 MIR608-201ENST00000384820 100 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AC092047.1-201ENST00000424997 240 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AL513185.3-201ENST00000433335 1300 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 MTCYBP3-201ENST00000445588 1137 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AC138853.1-201ENST00000503549 823 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 RNU6-491P-201ENST00000516099 110 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AC087481.2-201ENST00000565492 330 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AL009028.1-201ENST00000604895 802 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AC004492.1-201ENST00000607036 742 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.28□□□□□ -2.36
PCNX1Q96RV3 AC007792.1-201ENST00000623023 402 ntBASIC0.28□□□□□ -2.36
PCNX1Q96RV3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 RNU2-64P-201ENST00000411315 191 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AC092634.2-201ENST00000428146 1010 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 RPL37P21-201ENST00000435890 276 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 MTND4P6-201ENST00000438297 472 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AC087477.1-201ENST00000465747 340 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 RNU6-889P-201ENST00000517189 103 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 MIR4661-201ENST00000582720 75 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 XIAPP1-201ENST00000603162 600 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AC068276.1-201ENST00000605793 379 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 Y_RNA.493-201ENST00000384422 102 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AL136372.1-201ENST00000403060 228 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 VPS26BP1-201ENST00000417155 755 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 EIF4EP2-201ENST00000422816 654 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AC114982.1-201ENST00000469402 321 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AF213884.2-201ENST00000510417 903 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 MTCO2P22-201ENST00000603246 681 ntBASIC0.27□□□□□ -2.37
PCNX1Q96RV3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.27□□□□□ -2.37
PCNX1Q96RV3 GDI2P1-201ENST00000429312 1336 ntBASIC0.26□□□□□ -2.37
PCNX1Q96RV3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
PCNX1Q96RV3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.26□□□□□ -2.37
PCNX1Q96RV3 RNU1-124P-201ENST00000363861 145 ntBASIC0.26□□□□□ -2.37
PCNX1Q96RV3 RNU6-46P-201ENST00000383860 107 ntBASIC0.26□□□□□ -2.37
PCNX1Q96RV3 RPS3AP37-201ENST00000419176 745 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms