Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 OR5T3-201ENST00000303059 1023 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 RNU6-188P-201ENST00000364207 107 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 SNORD1A-201ENST00000364968 72 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC083799.1-201ENST00000366451 910 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 MIR506-201ENST00000384998 124 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 RNU6-754P-201ENST00000391166 107 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AL021407.1-201ENST00000404531 386 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC139712.2-201ENST00000424302 339 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC027119.1-201ENST00000440877 241 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC114878.1-201ENST00000441166 358 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC009474.2-201ENST00000451383 136 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 DUXAP8-207ENST00000456786 622 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC116655.1-201ENST00000508324 901 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 RNU6-1183P-201ENST00000517054 60 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 CENPUP1-201ENST00000526649 1202 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC006518.2-201ENST00000542513 940 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 MIR4303-201ENST00000581299 66 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC025811.1-201ENST00000604312 472 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 RNU6-91P-201ENST00000607774 107 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 AC010975.3-201ENST00000618727 978 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 HAUS6P2-201ENST00000433254 2404 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
AP1S3Q96PC3 TEX21P-201ENST00000447107 1476 ntBASIC0.8□□□□□ -2.28
AP1S3Q96PC3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
AP1S3Q96PC3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 MTCO2P5-201ENST00000422621 426 ntBASIC0.79□□□□□ -2.28
AP1S3Q96PC3 RN7SKP210-201ENST00000459176 261 ntBASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 SUB1P4-201ENST00000566062 339 ntBASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
AP1S3Q96PC3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
AP1S3Q96PC3 MIR6134-201ENST00000617606 109 ntBASIC0.79□□□□□ -2.28
AP1S3Q96PC3 RNU6-512P-201ENST00000364438 103 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 RNU6-114P-201ENST00000384704 105 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 MIR1289-2-201ENST00000408360 111 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 SRIP3-201ENST00000413200 219 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 ISCA1P1-201ENST00000426679 387 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 RPL36AP53-201ENST00000432891 316 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 RPL23AP76-201ENST00000441860 458 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AC020550.1-201ENST00000447385 163 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 snoU13.15-201ENST00000459407 104 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AC087477.1-201ENST00000465747 340 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 MTCYBP16-201ENST00000509187 1129 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 MTND5P13-201ENST00000513046 1079 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 RNU5B-3P-201ENST00000516601 115 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AC023632.1-201ENST00000518463 375 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AP003392.2-201ENST00000527269 208 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 LINC00557-201ENST00000563184 1279 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.78□□□□□ -2.28
AP1S3Q96PC3 MIR4789-201ENST00000577469 82 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AF038458.1-201ENST00000588406 262 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 AC009237.15-201ENST00000610252 501 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 uc_338.12-201ENST00000616344 181 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.78□□□□□ -2.28
AP1S3Q96PC3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.78□□□□□ -2.29
AP1S3Q96PC3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 RNU6-216P-201ENST00000363282 104 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 RNA5SP126-201ENST00000365092 109 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 RNU6-1280P-201ENST00000365211 107 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 RNU6-952P-201ENST00000391164 108 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 RNU2-32P-201ENST00000411193 191 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 TPMTP2-201ENST00000414372 726 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 BTF3P4-201ENST00000418852 495 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AL022400.1-201ENST00000423946 935 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 GPM6BP2-201ENST00000432046 144 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 GPM6BP1-201ENST00000446387 144 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 MRPL42P4-201ENST00000453267 443 ntBASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.77□□□□□ -2.29
AP1S3Q96PC3 AC109927.2-201ENST00000506416 303 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms