Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AL732372.2-207ENST00000445840 183 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 SEPT14P2-201ENST00000453405 183 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AL121769.1-201ENST00000469473 401 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 MED28P2-201ENST00000475771 317 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 CCDC34P1-201ENST00000507441 517 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 SEPT14P4-201ENST00000513445 186 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 FO082796.1-201ENST00000523795 183 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC138761.3-201ENST00000579993 334 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 MIR4765-201ENST00000585007 77 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.8□□□□□ -1.96
CMTM3Q96MX0 Z82243.1-201ENST00000609432 473 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 U4.5-201ENST00000617137 123 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC098679.4-201ENST00000624241 654 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 Z69720.2-201ENST00000624755 279 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 AC135776.4-201ENST00000624300 1904 ntBASIC2.8□□□□□ -1.96
CMTM3Q96MX0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AL359854.1-201ENST00000614203 1594 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC138393.1-203ENST00000327086 343 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 RNU1-70P-201ENST00000362618 164 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AL359837.1-201ENST00000381357 287 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 MIR554-201ENST00000384874 96 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 FABP5P14-201ENST00000437273 393 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC091885.1-201ENST00000506658 268 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 SNORA43.2-201ENST00000516652 128 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 SNORA25.17-201ENST00000517184 124 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 TRMT10BP1-201ENST00000519377 943 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 RPL7P20-201ENST00000520308 745 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC007991.1-201ENST00000522680 631 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC005476.1-201ENST00000554427 397 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AC069234.5-201ENST00000611056 416 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 MIR3529-201ENST00000637713 78 ntBASIC2.79□□□□□ -1.96
CMTM3Q96MX0 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.79□□□□□ -1.96
CMTM3Q96MX0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 Y_RNA.6-201ENST00000362350 114 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 Y_RNA.9-201ENST00000362354 101 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 RNU6-38P-201ENST00000384085 107 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 RNU6-843P-201ENST00000384454 104 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 Y_RNA.554-201ENST00000384672 102 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 RNU6-908P-201ENST00000410160 94 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 BX323014.1-201ENST00000412876 237 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 MTCO1P21-201ENST00000416634 589 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 USP9YP27-201ENST00000418455 438 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 Z98742.2-201ENST00000431564 187 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 AL365400.1-201ENST00000431854 640 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 RNU6-333P-201ENST00000459117 107 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 MTCO3P38-201ENST00000468910 766 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 SNORD60.2-201ENST00000516883 86 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 SNORA31.18-201ENST00000517043 134 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 OR11H5P-201ENST00000554039 926 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 RN7SL703P-201ENST00000578485 302 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 NRBF2P5-201ENST00000603087 788 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 RPL12P50-201ENST00000603116 116 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 AC008121.1-201ENST00000603244 268 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 AC004492.1-201ENST00000607036 742 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 YWHAEP7-203ENST00000622054 312 ntBASIC2.78□□□□□ -1.96
CMTM3Q96MX0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CMTM3Q96MX0 HAUS6P2-201ENST00000433254 2404 ntBASIC2.78□□□□□ -1.97
CMTM3Q96MX0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
CMTM3Q96MX0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms