Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC42Q96M95 AC092447.10-201ENST00000620607 1652 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 RNU6-661P-201ENST00000362409 107 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 RNU6-207P-201ENST00000384137 107 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 RNU6-611P-201ENST00000384276 104 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 SNORD14D-201ENST00000384390 87 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 MIR518D-201ENST00000385014 87 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 RN7SKP284-201ENST00000411002 343 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC42Q96M95 MEMO1P3-201ENST00000459811 302 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AC023194.1-201ENST00000493084 308 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 MTCO3P15-201ENST00000526563 574 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC42Q96M95 AC005832.3-201ENST00000537929 631 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC42Q96M95 AP000763.2-201ENST00000540641 163 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 RRN3P3-201ENST00000549207 578 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC42Q96M95 MIR4422-201ENST00000581938 83 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.6-201ENST00000603753 252 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.11-201ENST00000604059 253 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AC073413.2-201ENST00000604332 360 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AC008162.1-201ENST00000604718 254 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.1-201ENST00000604752 252 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.2-201ENST00000604983 252 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.5-201ENST00000605253 252 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.4-201ENST00000605279 254 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.12-201ENST00000605291 253 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.8-201ENST00000605353 252 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AL670379.7-201ENST00000605823 252 ntBASIC1.27□□□□□ -2.21
CCDC42Q96M95 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 RNU6-457P-201ENST00000363999 107 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 AL079342.2-201ENST00000403367 482 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 RNU2-36P-201ENST00000410361 191 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 RPL21P24-201ENST00000413752 448 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 AL354941.1-201ENST00000438600 464 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 MTND5P14-201ENST00000441481 1267 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 MTND1P31-201ENST00000449206 961 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 RPL18AP17-201ENST00000455326 198 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 PRELID3BP1-201ENST00000457142 540 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 AC104563.1-201ENST00000476147 376 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 MTCYBP43-201ENST00000513621 740 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 AP005660.1-201ENST00000522972 293 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 AC079148.1-201ENST00000565944 819 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.26□□□□□ -2.21
CCDC42Q96M95 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 CYP2C61P-201ENST00000604072 290 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 AC096772.1-201ENST00000609146 564 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 RBBP8P1-201ENST00000449447 1844 ntBASIC1.26□□□□□ -2.21
CCDC42Q96M95 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CCDC42Q96M95 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 RNU1-58P-201ENST00000362413 163 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 RNU1-17P-201ENST00000363022 152 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 RNU6-1164P-201ENST00000364428 107 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC008267.5-201ENST00000424928 265 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC010095.1-201ENST00000443543 144 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AL590365.1-201ENST00000450788 243 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 RN7SKP210-201ENST00000459176 261 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC109927.2-201ENST00000506416 303 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC117532.1-201ENST00000514638 323 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC084364.2-201ENST00000546924 395 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC136619.2-201ENST00000563361 631 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 MIR4782-201ENST00000577987 79 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC023043.2-201ENST00000589678 1026 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 CLIC4P2-201ENST00000601934 717 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AL445435.1-201ENST00000604232 665 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AL512598.1-201ENST00000610158 273 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 AC241585.2-209ENST00000638217 143 ntBASIC1.25□□□□□ -2.21
CCDC42Q96M95 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC42Q96M95 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC42Q96M95 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC42Q96M95 Y_RNA.67-201ENST00000362870 100 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 RNU1-78P-201ENST00000391248 165 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AL022400.1-201ENST00000423946 935 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC104651.1-201ENST00000427559 735 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 PTENP1-201ENST00000447117 1215 ntBASIC1.24□□□□□ -2.21
CCDC42Q96M95 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC42Q96M95 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms